7SZ8

Crystal structure of human CELSR1 EC4-7

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP	7.5	277	0.1 M magnesium chloride, 0.1 M MES pH 7.3, 30% PEG400

Crystal Properties
Matthews coefficient	Solvent content
2.99	58.83

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 42.384	α = 89.834
b = 76.943	β = 87.776
c = 92.742	γ = 76.235

Symmetry
Space Group	P 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS EIGER2 X 16M		2020-03-08	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	APS BEAMLINE 24-ID-C	0.97911	APS	24-ID-C

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.337	46.378	85.3	0.992	15.375	3.3		47823

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2.337	2.39	82.5		0.984	8.824	3.2

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	FREE R-VALUE	5t9t, 5szn, 5v5x, 6c13, 6e6b, 6vg4	2.337	46.378	40785	1974	84.627	0.217	0.2133	0.2794	37.087

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-2.333	2.056	-3.349	-4.996	3.032	8.536

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	36.649
r_dihedral_angle_4_deg	19.575
r_dihedral_angle_3_deg	15.195
r_dihedral_angle_1_deg	8.649
r_lrange_it	2.959
r_lrange_other	2.916
r_angle_refined_deg	1.752
r_mcangle_it	1.596
r_mcangle_other	1.596
r_scangle_it	1.53
r_scangle_other	1.53
r_angle_other_deg	1.23
r_mcbond_it	0.958
r_mcbond_other	0.957
r_scbond_it	0.929
r_scbond_other	0.929
r_nbd_refined	0.226
r_nbd_other	0.194
r_symmetry_nbd_other	0.184
r_symmetry_nbd_refined	0.174
r_xyhbond_nbd_refined	0.172
r_metal_ion_refined	0.168
r_nbtor_refined	0.158
r_symmetry_xyhbond_nbd_other	0.095
r_symmetry_nbtor_other	0.077
r_chiral_restr	0.07
r_symmetry_xyhbond_nbd_refined	0.068
r_bond_refined_d	0.01
r_gen_planes_refined	0.008
r_bond_other_d	0.001
r_gen_planes_other	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	6472
Nucleic Acid Atoms
Solvent Atoms	157
Heterogen Atoms	20

Software

Software
Software Name	Purpose
REFMAC	refinement
HKL-2000	data reduction
HKL-2000	data scaling
PHASER	phasing