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HtrA1S328A:Fab15H6.v4 complex
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3TJN
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 4.564 f_angle_d 0.61 f_chiral_restr 0.045 f_plane_restr 0.005 f_bond_d 0.003
Sample HtrA1PD/SA bound by Fab15H6.v4 at LoopA epitope
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument LEICA EM GP Cryogen Name ETHANE Sample Vitrification Details 3.5s blot time
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 219676 Reported Resolution (Å) 3.3 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 (3TJN) Refinement Space Refinement Protocol RIGID BODY FIT Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 BIOQUANTUM (6k x 4k) Electron Dose (electrons/Å**2) 65
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 500 Maximum Defocus (nm) 1500 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification 105000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version IMAGE ACQUISITION SerialEM MODEL REFINEMENT PHENIX RECONSTRUCTION cisTEM
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 505669