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Wild-type Escherichia coli ribosome with antibiotic radezolid
Sample wild-type Escherichia coli ribosome with antibiotic radezolid
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 146245 Reported Resolution (Å) 2.47 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 Refinement Space REAL Refinement Protocol FLEXIBLE FIT Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K2 SUMMIT (4k x 4k) Electron Dose (electrons/Å**2) 52.8
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 500 Maximum Defocus (nm) 1200 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version IMAGE ACQUISITION Leginon CTF CORRECTION cisTEM v1.0.0-beta MODEL FITTING PHENIX 1.19.2 MODEL FITTING UCSF ChimeraX 1.2.5 (2021-05-24) MODEL FITTING ISOLDE 1.2.2 MODEL FITTING Coot 0.8.9.3-pre (revision-count 8011) MODEL FITTING PyMOL Version 1.2r3pre MODEL REFINEMENT PHENIX 1.19.2 MODEL REFINEMENT ISOLDE 1.2.2 INITIAL EULER ASSIGNMENT cisTEM v1.0.0-beta FINAL EULER ASSIGNMENT cisTEM v1.0.0-beta CLASSIFICATION cisTEM v1.0.0-beta RECONSTRUCTION cisTEM v1.0.0-beta
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 179529