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SeMet Tailspike protein 4 (TSP4) phage CBA120, residues 1-335, obtained in the presence of LiSO4
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7.5 295 1.6 M lithium sulfate, 0.1 M sodium chloride, 0.1 M HEPES, pH 7.5
Crystal Properties Matthews coefficient Solvent content 3.31 62.86
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 67.9 α = 90 b = 67.9 β = 90 c = 607.2 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER X 16M mirrors 2020-04-15 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 23-ID-B 0.97934 APS 23-ID-B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.02 48.01 94.4 0.228 0.999 20.4 66.9 28173 119.4
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.02 3.2 0.256
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 3.02 30 26761 1370 94.43 0.2281 0.2249 0.2371 0.2956 0.2964 RANDOM 141.892
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.13 2.13 -4.26
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.572 r_dihedral_angle_3_deg 24.344 r_dihedral_angle_4_deg 18.146 r_dihedral_angle_1_deg 6.677 r_angle_refined_deg 1.843 r_angle_other_deg 1.535 r_chiral_restr 0.074 r_bond_refined_d 0.01 r_bond_other_d 0.007 r_gen_planes_other 0.005
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.572 r_dihedral_angle_3_deg 24.344 r_dihedral_angle_4_deg 18.146 r_dihedral_angle_1_deg 6.677 r_angle_refined_deg 1.843 r_angle_other_deg 1.535 r_chiral_restr 0.074 r_bond_refined_d 0.01 r_bond_other_d 0.007 r_gen_planes_other 0.005 r_gen_planes_refined 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7073 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction TRUNCATE data reduction Aimless data scaling AutoSol phasing