7QSE

human Carbonic Anhydrase II in complex with N-(2-aminophenyl)-4-((2-oxo-2-((4-sulfamoylbenzyl)amino)ethyl)amino)benzamide


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP82931.5 M sodium citrate, 0.1 M Tris pH 8.0
Crystal Properties
Matthews coefficientSolvent content
2.0840.89

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 42.317α = 90
b = 41.243β = 104.346
c = 72.085γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS 6M2019-03-08MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONELETTRA BEAMLINE 11.2C1.0ELETTRA11.2C

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)Rpim I (All)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.42841.2497.20.0290.0350.019132.96.443568
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)Rpim I (All)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.431.4592.40.2610.3210.1840.935.6

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTNONE4FIK1.42835.53843548223696.9050.1480.1470.164214.597
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.115-0.1080.0170.135
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.541
r_dihedral_angle_4_deg25.318
r_dihedral_angle_3_deg11.737
r_dihedral_angle_1_deg7.237
r_lrange_it5.09
r_lrange_other4.971
r_scangle_it4.2
r_scangle_other4.199
r_scbond_it2.768
r_scbond_other2.767
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.541
r_dihedral_angle_4_deg25.318
r_dihedral_angle_3_deg11.737
r_dihedral_angle_1_deg7.237
r_lrange_it5.09
r_lrange_other4.971
r_scangle_it4.2
r_scangle_other4.199
r_scbond_it2.768
r_scbond_other2.767
r_mcangle_it2.191
r_mcangle_other2.19
r_angle_refined_deg1.999
r_angle_other_deg1.492
r_mcbond_it1.49
r_mcbond_other1.49
r_symmetry_nbd_refined0.289
r_nbd_other0.249
r_nbd_refined0.235
r_symmetry_nbd_other0.2
r_symmetry_xyhbond_nbd_refined0.185
r_nbtor_refined0.179
r_xyhbond_nbd_refined0.15
r_chiral_restr0.105
r_symmetry_nbtor_other0.088
r_metal_ion_refined0.062
r_bond_refined_d0.015
r_gen_planes_refined0.012
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2054
Nucleic Acid Atoms
Solvent Atoms221
Heterogen Atoms39

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
Aimlessdata scaling
REFMACphasing