7QOB

Human Carbonic Anhydrase I in complex with benzoselenoate


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP929328-31% PEG4000, 0.2 M Sodium acetate, 0.1 M Tris pH 8.5-9.0
Crystal Properties
Matthews coefficientSolvent content
2.3146.67

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 62.08α = 90
b = 70.64β = 90
c = 121.63γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS 6M2019-07-16MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONELETTRA BEAMLINE 11.2C1.0ELETTRA11.2C

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)Rpim I (All)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.840.5499.80.1350.1470.0610.788.810.650254
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.81.8499.20.79810

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTNONE1JV01.837.03350111237599.4820.2070.2050.243128.971
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.4593.847-2.389
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.433
r_dihedral_angle_4_deg18.943
r_dihedral_angle_3_deg15.258
r_dihedral_angle_1_deg7.774
r_lrange_other5.795
r_lrange_it5.791
r_scangle_it4.466
r_scangle_other4.466
r_mcangle_it3.158
r_mcangle_other3.158
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.433
r_dihedral_angle_4_deg18.943
r_dihedral_angle_3_deg15.258
r_dihedral_angle_1_deg7.774
r_lrange_other5.795
r_lrange_it5.791
r_scangle_it4.466
r_scangle_other4.466
r_mcangle_it3.158
r_mcangle_other3.158
r_scbond_it2.922
r_scbond_other2.921
r_mcbond_it2.26
r_mcbond_other2.244
r_angle_refined_deg1.7
r_angle_other_deg1.306
r_nbd_other0.244
r_symmetry_nbd_refined0.211
r_nbd_refined0.193
r_symmetry_nbd_other0.181
r_nbtor_refined0.164
r_symmetry_xyhbond_nbd_refined0.143
r_xyhbond_nbd_refined0.126
r_symmetry_xyhbond_nbd_other0.113
r_symmetry_nbtor_other0.079
r_chiral_restr0.075
r_metal_ion_refined0.016
r_bond_refined_d0.009
r_gen_planes_refined0.008
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4016
Nucleic Acid Atoms
Solvent Atoms240
Heterogen Atoms20

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
Aimlessdata scaling
REFMACphasing