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CRYSTAL STRUCTURE OF E.coli ALCOHOL DEHYDROGENASE - FucO MUTANT N151G, L259V COMPLEXED WITH FE, NAD+, AND ETHYLENE GLYCOL
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1RRM
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 8.5 295.15 0.1 M Bis-tris pH 8.5, 20 % (w/v) PEG 6000, 0.2 M NaF
Crystal Properties Matthews coefficient Solvent content 2.18 43.67
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 61.838 α = 90 b = 85.765 β = 90 c = 136.681 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER2 XE 16M 2019-08-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I03 0.97625 Diamond I03
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.14 36.71 100 0.07 0.997 8.4 13.3 40916 32.565
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.14 2.2 0.976 0.522 1.2 13.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE 1RRM 2.14 36.707 40834 2050 99.929 0.181 0.1786 0.1787 0.2257 0.2256 41.637
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.843 0.588 1.254
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.76 r_dihedral_angle_4_deg 14.737 r_dihedral_angle_3_deg 13.556 r_dihedral_angle_1_deg 7.459 r_lrange_it 3.598 r_lrange_other 3.554 r_angle_other_deg 2.324 r_scangle_it 1.505 r_scangle_other 1.504 r_angle_refined_deg 1.385
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.76 r_dihedral_angle_4_deg 14.737 r_dihedral_angle_3_deg 13.556 r_dihedral_angle_1_deg 7.459 r_lrange_it 3.598 r_lrange_other 3.554 r_angle_other_deg 2.324 r_scangle_it 1.505 r_scangle_other 1.504 r_angle_refined_deg 1.385 r_mcangle_it 1.271 r_mcangle_other 1.271 r_scbond_it 0.94 r_scbond_other 0.94 r_mcbond_it 0.792 r_mcbond_other 0.792 r_symmetry_nbd_other 0.211 r_nbd_other 0.205 r_nbd_refined 0.2 r_symmetry_xyhbond_nbd_refined 0.193 r_symmetry_nbd_refined 0.163 r_nbtor_refined 0.151 r_xyhbond_nbd_refined 0.142 r_symmetry_xyhbond_nbd_other 0.099 r_chiral_restr 0.062 r_symmetry_nbtor_other 0.061 r_bond_other_d 0.036 r_bond_refined_d 0.006 r_gen_planes_refined 0.005 r_gen_planes_other 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5684 Nucleic Acid Atoms Solvent Atoms 266 Heterogen Atoms 108
Software Software Software Name Purpose REFMAC refinement DIALS data reduction Aimless data scaling REFMAC phasing