7QCY

Two-state liquid NMR Structure of a PDZ2 Domain from hPTP1E, complexed with RA-GEF2 peptide


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D 1H-13C NOESY2 mM [U-100% 13C; U-100% 15N] PDZ2 domain, 2 mM RA-GEF2 peptide95% H2O/5% D2O150 mM6.81 atm298Bruker AVANCE 700
23D HNCA2 mM [U-100% 13C; U-100% 15N] PDZ2 domain, 2 mM RA-GEF2 peptide95% H2O/5% D2O150 mM6.81 atm298Bruker AVANCE 700
33D HN(CO)CA2 mM [U-100% 13C; U-100% 15N] PDZ2 domain, 2 mM RA-GEF2 peptide95% H2O/5% D2O150 mM6.81 atm298Bruker AVANCE 700
43D HNCACB2 mM [U-100% 13C; U-100% 15N] PDZ2 domain, 2 mM RA-GEF2 peptide95% H2O/5% D2O150 mM6.81 atm298Bruker AVANCE 700
53D HN(COCA)CB2 mM [U-100% 13C; U-100% 15N] PDZ2 domain, 2 mM RA-GEF2 peptide95% H2O/5% D2O150 mM6.81 atm298Bruker AVANCE 700
62D 1H-13C HSQC2 mM [U-100% 13C; U-100% 15N] PDZ2 domain, 2 mM RA-GEF2 peptide95% H2O/5% D2O150 mM6.81 atm298Bruker AVANCE 700
72D 1H-15N HSQC2 mM [U-100% 13C; U-100% 15N] PDZ2 domain, 2 mM RA-GEF2 peptide95% H2O/5% D2O150 mM6.81 atm298Bruker AVANCE 700
83D HCCH-TOCSY2 mM [U-100% 13C; U-100% 15N] PDZ2 domain, 2 mM RA-GEF2 peptide95% H2O/5% D2O150 mM6.81 atm298Bruker AVANCE 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE700
NMR Refinement
MethodDetailsSoftware
simulated annealingCYANA
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number2000
Conformers Submitted Total Number40
Representative Model1 (target function)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure calculationCYANAGuntert, Mumenthaler and Wuthrich
3chemical shift assignmentXEASYBartels et al.
4peak pickingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax