7PU1

High resolution X-ray structure of Thermoascus aurantiacus LPMO

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP	7.5	293	0.1 M HEPES pH 7.5, 20m M MgCl2 and 22 %(w/v) polyacrylic acid 5100 sodium salt

Crystal Properties
Matthews coefficient	Solvent content
2.35	47.75

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 37.653	α = 90
b = 89.046	β = 103.335
c = 70.47	γ = 90

Symmetry
Space Group	P 1 21 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS EIGER X 16M		2020-06-26	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	MAX IV BEAMLINE BioMAX	0.9538	MAX IV	BioMAX

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	Rrim I (All)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.06	37.34	84.2	0.054	0.99	18.57	6.6		171807

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	Rrim I (All)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.06	1.1			0.44	0.89	3.6

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	FREE R-VALUE	2YET	1.06	37.37	163069	8758	84.244	0.119	0.11735	0.11851	12.983

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
0.072		0.194	-0.221		0.052

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	39.731
r_dihedral_angle_4_deg	20.868
r_dihedral_angle_1_deg	19.132
r_dihedral_angle_3_deg	11.886
r_rigid_bond_restr	8.906
r_lrange_it	3.715
r_scbond_it	3.625
r_scbond_other	3.624
r_lrange_other	3.271
r_scangle_it	3.24
r_scangle_other	3.24
r_angle_refined_deg	2.304
r_mcangle_it	1.834
r_mcangle_other	1.82
r_angle_other_deg	1.624
r_mcbond_it	1.376
r_mcbond_other	1.356
r_nbd_refined	0.253
r_xyhbond_nbd_refined	0.208
r_symmetry_nbd_other	0.203
r_symmetry_xyhbond_nbd_refined	0.179
r_nbtor_refined	0.175
r_symmetry_nbd_refined	0.142
r_chiral_restr	0.129
r_nbd_other	0.103
r_symmetry_nbtor_other	0.1
r_metal_ion_refined	0.091
r_bond_refined_d	0.019
r_gen_planes_refined	0.013
r_gen_planes_other	0.008
r_bond_other_d	0.007

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	3445
Nucleic Acid Atoms
Solvent Atoms	719
Heterogen Atoms	49

Software

Software
Software Name	Purpose
REFMAC	refinement
XDS	data reduction
TRUNCATE	data scaling
REFMAC	phasing