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Solution structure of the NRDI domain of Nab3
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 25 mM potassium phosphate, 25 mM sodium chloride, 1 mM DTT, 480 uM [U-100% 13C; U-100% 15N] Nab3 90% H2O/10% D2O 53.5 mM 6.6 1 atm 308 Bruker AVANCE 800 2 2D 1H-13C HSQC 25 mM potassium phosphate, 25 mM sodium chloride, 1 mM DTT, 480 uM [U-100% 13C; U-100% 15N] Nab3 100% D2O 53.5 mM 6.6 1 atm 308 Bruker AVANCE 800 3 3D HNCA 25 mM potassium phosphate, 25 mM sodium chloride, 1 mM DTT, 480 uM [U-100% 13C; U-100% 15N] Nab3 90% H2O/10% D2O 53.5 mM 6.6 1 atm 308 Bruker AVANCE 800 4 3D HNCO 25 mM potassium phosphate, 25 mM sodium chloride, 1 mM DTT, 480 uM [U-100% 13C; U-100% 15N] Nab3 90% H2O/10% D2O 53.5 mM 6.6 1 atm 308 Bruker AVANCE 800 5 3D CBCA(CO)NH 25 mM potassium phosphate, 25 mM sodium chloride, 1 mM DTT, 480 uM [U-100% 13C; U-100% 15N] Nab3 90% H2O/10% D2O 53.5 mM 6.6 1 atm 308 Bruker AVANCE 800 6 3D HNCACB 25 mM potassium phosphate, 25 mM sodium chloride, 1 mM DTT, 480 uM [U-100% 13C; U-100% 15N] Nab3 90% H2O/10% D2O 53.5 mM 6.6 1 atm 308 Bruker AVANCE 800 7 3D HCCH-TOCSY 25 mM potassium phosphate, 25 mM sodium chloride, 1 mM DTT, 480 uM [U-100% 13C; U-100% 15N] Nab3 100% D2O 53.5 mM 6.6 1 atm 308 Bruker AVANCE 800 9 2D 1H-1H NOESY 25 mM potassium phosphate, 25 mM sodium chloride, 1 mM DTT, 480 uM Nab3 90% H2O/10% D2O 53.5 mM 6.6 1 atm 308 Bruker AVANCE 800 8 2D 1H-1H NOESY 25 mM potassium phosphate, 25 mM sodium chloride, 1 mM DTT, 480 uM Nab3 100% D2O 53.5 mM 6.6 1 atm 308 Bruker AVANCE 800
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800
NMR Refinement Method Details Software simulated annealing CYANA
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 50 Conformers Submitted Total Number 20 Representative Model 1 (medoid)
Computation: NMR Software # Classification Version Software Name Author 1 collection TopSpin Bruker Biospin 2 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 3 chemical shift assignment CcpNmr Analysis CCPN 4 structure calculation CYANA Guntert, Mumenthaler and Wuthrich