7OQT

G-quadruplex structure of the C. elegans telomeric repeat: A two tetrads basket type conformation stabilised by a Hoogsteen C-T base-pair


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H NOESY2.4 mM 1H Asc2090% H2O/10% D2O90 mM6.91 atm288Bruker AVANCE III 700
22D 1H-13C HSQC2.4 mM 1H Asc2090% H2O/10% D2O90 mM6.91 atm288Bruker AVANCE III 700
32D 1H-13C HMBC2.4 mM 1H Asc2090% H2O/10% D2O90 mM6.91 atm288Bruker AVANCE III 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III700
NMR Refinement
MethodDetailsSoftware
molecular dynamicsAmber
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number750
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingTopSpinBruker Biospin
2chemical shift assignmentSparkyGoddard
3structure calculationARIALinge, O'Donoghue and Nilges
4refinementAmberCase, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman