7ONQ

Carbonic anhydrase II mutant (E69C) dually binding an IrCp* complex to generate an artificial transfer hydrogenase (ATHase)


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP7.52930.1 M HEPES sodium pH 7.5, 1.4 M Sodium citrate tribasic dihydrate
Crystal Properties
Matthews coefficientSolvent content
2.1542.68

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 42.295α = 90
b = 41.462β = 103.896
c = 72.2γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS 2M-F2019-03-29MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X06DA1.0007SLSX06DA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.6541.09198.70.0550.999266.229132
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.651.680.2860.9034.6

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTFREE R-VALUE6QFU1.6541.09129119145798.6520.1360.13420.169915.096
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.2250.307-0.3830.406
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_other_3_deg59.762
r_dihedral_angle_2_deg35.122
r_dihedral_angle_4_deg17.706
r_dihedral_angle_3_deg12.03
r_dihedral_angle_1_deg7.521
r_lrange_it5.514
r_lrange_other5.351
r_angle_refined_deg4.521
r_scangle_it3.849
r_scangle_other3.848
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_other_3_deg59.762
r_dihedral_angle_2_deg35.122
r_dihedral_angle_4_deg17.706
r_dihedral_angle_3_deg12.03
r_dihedral_angle_1_deg7.521
r_lrange_it5.514
r_lrange_other5.351
r_angle_refined_deg4.521
r_scangle_it3.849
r_scangle_other3.848
r_scbond_it2.563
r_scbond_other2.562
r_mcangle_it1.85
r_mcangle_other1.85
r_angle_other_deg1.439
r_mcbond_it1.241
r_mcbond_other1.24
r_symmetry_nbd_refined0.303
r_nbd_other0.218
r_symmetry_xyhbond_nbd_refined0.215
r_nbd_refined0.206
r_xyhbond_nbd_refined0.202
r_symmetry_nbd_other0.186
r_nbtor_refined0.177
r_symmetry_xyhbond_nbd_other0.166
r_chiral_restr0.09
r_symmetry_nbtor_other0.087
r_metal_ion_refined0.08
r_bond_refined_d0.015
r_gen_planes_refined0.011
r_bond_other_d0.002
r_gen_planes_other0.002
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2026
Nucleic Acid Atoms
Solvent Atoms179
Heterogen Atoms109

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
Aimlessdata scaling
PHASERphasing