7NT7

Solution structure of toll like receptor 1 (TLR1) TIR domain


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.8 mM [U-100% 13C; U-100% 15N] TLR1-TIR, 20 mM PIPES, 25 mM sodium chloride, 3 mM TCEP95% H2O/5% D2O50 mM6.3AMBIENT Pa308Bruker AVANCE III 800
23D HNCACB0.8 mM [U-100% 13C; U-100% 15N] TLR1-TIR, 20 mM PIPES, 25 mM sodium chloride, 3 mM TCEP95% H2O/5% D2O50 mM6.3AMBIENT Pa308Bruker AVANCE III 800
33D HCCH-TOCSY0.8 mM [U-100% 13C; U-100% 15N] TLR1-TIR, 20 mM PIPES, 25 mM sodium chloride, 3 mM TCEP95% H2O/5% D2O50 mM6.3AMBIENT Pa308Bruker AVANCE III 800
43D HCCH-COSY0.8 mM [U-100% 13C; U-100% 15N] TLR1-TIR, 20 mM PIPES, 25 mM sodium chloride, 3 mM TCEP95% H2O/5% D2O50 mM6.3AMBIENT Pa308Bruker AVANCE III 800
53D 1H-13C NOESY0.8 mM [U-100% 13C; U-100% 15N] TLR1-TIR, 20 mM PIPES, 25 mM sodium chloride, 3 mM TCEP95% H2O/5% D2O50 mM6.3AMBIENT Pa308Bruker AVANCE III 800
63D 1H-13C NOESY aromatic0.8 mM [U-100% 13C; U-100% 15N] TLR1-TIR, 20 mM PIPES, 25 mM sodium chloride, 3 mM TCEP95% H2O/5% D2O50 mM6.3AMBIENT Pa308Bruker AVANCE III 800
73D 1H-15N NOESY0.8 mM [U-100% 13C; U-100% 15N] TLR1-TIR, 20 mM PIPES, 25 mM sodium chloride, 3 mM TCEP95% H2O/5% D2O50 mM6.3AMBIENT Pa308Bruker AVANCE III 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III800
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsCYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (fewest violations)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure calculationCYANA3.98.13Guntert, Mumenthaler and Wuthrich
2chemical shift assignmentCARA1.9.1Keller and Wuthrich
3processingqMDD2.7Orekhov, Mayzel
4processingTopSpinBruker Biospin
5peak pickingCARA1.9.1Keller and Wuthrich