7MZW

Anaplastic lymphoma kinase (ALK) extracellular ligand binding region 673-1025


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
22D 1H-15N HSQC300 uM [U-100% 13C; U-100% 15N; U-100% 2H] Anaplastic lymphoma kinase ALK extracellular domain 673-1025, 20 mM sodium phosphate, 150 mM sodium chloride, 0.1 % sodium azide90% H2O/10% D2O170 mM7.01 atm308Bruker AVANCE NEO 850
32D 1H-13C HSQC aromatic400 uM U-2H,15N-1H13C_AILMTV_1H,13C-FY (Ce1,2) Anaplastic lymphoma kinase ALK extracellular domain 673-1025, 20 mM sodium phosphate, 150 mM sodium chloride, 0.1 % sodium azide90% H2O/10% D2O170 mM7.01 atm308Bruker AVANCE NEO 700
42D 1H-13C HMQC400 uM U-2H,15N-1H13C_AILMTV_1H,13C-FY (Ce1,2) Anaplastic lymphoma kinase ALK extracellular domain 673-1025, 20 mM sodium phosphate, 150 mM sodium chloride, 0.1 % sodium azide90% H2O/10% D2O170 mM7.01 atm308Bruker AVANCE NEO 1100
53D CBCA(CO)NH300 uM [U-100% 13C; U-100% 15N; U-100% 2H] Anaplastic lymphoma kinase ALK extracellular domain 673-1025, 20 mM sodium phosphate, 150 mM sodium chloride, 0.1 % sodium azide90% H2O/10% D2O170 mM7.01 atm308Bruker AVANCE NEO 850
173D HN(CO)CA300 uM [U-100% 13C; U-100% 15N; U-100% 2H] Anaplastic lymphoma kinase ALK extracellular domain 673-1025, 20 mM sodium phosphate, 150 mM sodium chloride, 0.1 % sodium azide90% H2O/10% D2O170 mM7.01 atm308Bruker AVANCE NEO 850
163D HNCO300 uM [U-100% 13C; U-100% 15N; U-100% 2H] Anaplastic lymphoma kinase ALK extracellular domain 673-1025, 20 mM sodium phosphate, 150 mM sodium chloride, 0.1 % sodium azide90% H2O/10% D2O170 mM7.01 atm308Bruker AVANCE NEO 850
153D HNCACB300 uM [U-100% 13C; U-100% 15N; U-100% 2H] Anaplastic lymphoma kinase ALK extracellular domain 673-1025, 20 mM sodium phosphate, 150 mM sodium chloride, 0.1 % sodium azide90% H2O/10% D2O170 mM7.01 atm308Bruker AVANCE NEO 850
143D HCACO300 uM [U-100% 13C; U-100% 15N; U-100% 2H] Anaplastic lymphoma kinase ALK extracellular domain 673-1025, 20 mM sodium phosphate, 150 mM sodium chloride, 0.1 % sodium azide90% H2O/10% D2O170 mM7.01 atm308Bruker AVANCE NEO 850
133D 1H-15N NOESY300 uM [U-100% 13C; U-100% 15N; U-100% 2H] Anaplastic lymphoma kinase ALK extracellular domain 673-1025, 20 mM sodium phosphate, 150 mM sodium chloride, 0.1 % sodium azide90% H2O/10% D2O170 mM7.01 atm308Bruker AVANCE NEO 850
123D CmCmHm_NOESY400 uM U-2H,15N-1H13C_AILMTV_1H,13C-FY (Ce1,2) Anaplastic lymphoma kinase ALK extracellular domain 673-1025, 20 mM sodium phosphate, 150 mM sodium chloride, 0.1 % sodium azide90% H2O/10% D2O170 mM7.01 atm308Bruker AVANCE NEO 1100
113D HNH_NOESY400 uM U-2H,15N-1H13C_AILMTV_1H,13C-FY (Ce1,2) Anaplastic lymphoma kinase ALK extracellular domain 673-1025, 20 mM sodium phosphate, 150 mM sodium chloride, 0.1 % sodium azide90% H2O/10% D2O170 mM7.01 atm308Bruker AVANCE NEO 850
103D HaCaHa_NOESY400 uM U-2H,15N-1H13C_AILMTV_1H,13C-FY (Ce1,2) Anaplastic lymphoma kinase ALK extracellular domain 673-1025, 20 mM sodium phosphate, 150 mM sodium chloride, 0.1 % sodium azide90% H2O/10% D2O170 mM7.01 atm308Bruker AVANCE NEO 700
93D CaCmHm_NOESY400 uM U-2H,15N-1H13C_AILMTV_1H,13C-FY (Ce1,2) Anaplastic lymphoma kinase ALK extracellular domain 673-1025, 20 mM sodium phosphate, 150 mM sodium chloride, 0.1 % sodium azide90% H2O/10% D2O170 mM7.01 atm308Bruker AVANCE NEO 700
83D CmNH_NOESY400 uM U-2H,15N-1H13C_AILMTV_1H,13C-FY (Ce1,2) Anaplastic lymphoma kinase ALK extracellular domain 673-1025, 20 mM sodium phosphate, 150 mM sodium chloride, 0.1 % sodium azide90% H2O/10% D2O170 mM7.01 atm308Bruker AVANCE NEO 850
73D NCmHm_NOESY400 uM U-2H,15N-1H13C_AILMTV_1H,13C-FY (Ce1,2) Anaplastic lymphoma kinase ALK extracellular domain 673-1025, 20 mM sodium phosphate, 150 mM sodium chloride, 0.1 % sodium azide90% H2O/10% D2O170 mM7.01 atm308Bruker AVANCE NEO 850
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE NEO1100
2BrukerAVANCE NEO850
3BrukerAVANCE NEO700
NMR Refinement
MethodDetailsSoftware
molecular dynamicsrestrained MD in explicit H2O bathCNS
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCNSBrunger, Adams, Clore, Gros, Nilges and Read
2structure calculationCYANAGuntert, Mumenthaler and Wuthrich
3chemical shift assignmentI-PINELee, Bahrami, Dashti, Eghbalnia, Tonelli, Westler and Markley
4peak pickingPINEBahrami, Markley, Assadi, and Eghbalnia
9collectionTopSpin4.06Bruker Biospin
8peak pickingNMRFAM-SPARKYlee
7geometry optimizationTALOS-NSHEN AND BAX
6processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
5data analysisPdbStattejero and montelione
10data analysisPSVSBhattacharya and Montelione