7MY8 | pdb_00007my8

Fusion Peptide of SARS-CoV-2 Spike Rearranges into a Wedge Inserted in Bilayered Micelles

SOLUTION NMR

---

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N TROSY	0.4 mM [U-99% 15N] Spike Fusion Peptide, Bicelles	90% H2O/10% D2O	0 M	5.0	0 Pa	305	Bruker AVANCE III 800
2	2D 1H-13C HSQC aliphatic	0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles	90% H2O/10% D2O	0 M	5.0	0 Pa	305	Bruker AVANCE III 800
3	3D HNCO	0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles	90% H2O/10% D2O	0 M	5.0	0 Pa	305	Bruker AVANCE III 800
4	3D HNCACO	0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles	90% H2O/10% D2O	0 M	5.0	0 Pa	305	Bruker AVANCE III 800
5	3D CBCA(CO)NH	0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles	90% H2O/10% D2O	0 M	5.0	0 Pa	305	Bruker AVANCE III 800
6	3D HNCACB	0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles	90% H2O/10% D2O	0 M	5.0	0 Pa	305	Bruker AVANCE III 800
7	3D C(CO)NH	0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles	90% H2O/10% D2O	0 M	5.0	0 Pa	305	Bruker AVANCE III 800
8	3D H(CCO)NH	0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles	90% H2O/10% D2O	0 M	5.0	0 Pa	305	Bruker AVANCE III 800
9	3D HCCH-TOCSY	0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles	90% H2O/10% D2O	0 M	5.0	0 Pa	305	Bruker AVANCE III 800
10	3D 15N Separated NOESY	0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles	90% H2O/10% D2O	0 M	5.0	0 Pa	305	Bruker AVANCE III 800
11	3D 13C Separated NOESY	0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles	90% H2O/10% D2O	0 M	5.0	0 Pa	305	Bruker AVANCE III 800
12	3D 13C TROSY edited NOESY	0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles	90% H2O/10% D2O	0 M	5.0	0 Pa	305	Bruker AVANCE III 800
13	2D 13C (Hb)Cb(CgCd)Hd	0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles	90% H2O/10% D2O	0 M	5.0	0 Pa	305	Bruker AVANCE III 800
14	2D 13C (Hb)Cb(CgCd)He	0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles	90% H2O/10% D2O	0 M	5.0	0 Pa	305	Bruker AVANCE III 800

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III	800
2	Bruker	AVANCE III	800

NMR Refinement
Method	Details	Software
molecular dynamics		GROMACS

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	50
Conformers Submitted Total Number	15
Representative Model	1 (medoid)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	chemical shift assignment	NMRFAM-SPARKY		Woonghee Lee , Marco Tonelli , John L Markley
2	structure calculation	CYANA	3.0	Guntert, Mumenthaler and Wuthrich
3	refinement	GROMACS		Berendsen
4	peak picking	NMRFAM-SPARKY		Woonghee Lee , Marco Tonelli , John L Markley