7MU9 | pdb_00007mu9

Solution NMR structure of the XVIPCD region from the T4SS effector X-Tfe(XAC2609) from Xanthomonas citri

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
9	3D HNCACB	1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide	93% H2O/7% D2O	100 mM NaCl mM	8.0	1016 mbar	298	Bruker AVANCE III 800
10	3D CBCA(CO)NH	1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide	93% H2O/7% D2O	100 mM NaCl mM	8.0	1016 mbar	298	Bruker AVANCE III 800
11	3D HNCA	1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide	93% H2O/7% D2O	100 mM NaCl mM	8.0	1016 mbar	298	Bruker AVANCE III 800
12	3D HN(CO)CA	1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide	93% H2O/7% D2O	100 mM NaCl mM	8.0	1016 mbar	298	Bruker AVANCE III 800
13	3D HNCO	1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide	93% H2O/7% D2O	100 mM NaCl mM	8.0	1016 mbar	298	Bruker AVANCE III 800
14	HN(CA)CO	1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide	93% H2O/7% D2O	100 mM NaCl mM	8.0	1016 mbar	298	Bruker AVANCE III 800
15	3D-(H)CCH	1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide	93% H2O/7% D2O	100 mM NaCl mM	8.0	1016 mbar	298	Bruker AVANCE III 800
16	3D-H(C)CH	1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide	93% H2O/7% D2O	100 mM NaCl mM	8.0	1016 mbar	298	Bruker AVANCE III 800
17	3D HCCH-TOCSY	1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide	93% H2O/7% D2O	100 mM NaCl mM	8.0	1016 mbar	298	Bruker AVANCE III 800
18	3D HCCH-TOCSY	1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide	93% H2O/7% D2O	100 mM NaCl mM	8.0	1016 mbar	298	Bruker AVANCE III 800
19	3D 15N NOESY-HSQC	1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide	93% H2O/7% D2O	100 mM NaCl mM	8.0	1016 mbar	298	Bruker AVANCE III 800
20	3D 13C NOESY-HSQC	1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide	93% H2O/7% D2O	100 mM NaCl mM	8.0	1016 mbar	298	Bruker AVANCE III 800
21	2D 1H-1H NOESY	1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide	93% H2O/7% D2O	100 mM NaCl mM	8.0	1016 mbar	298	Bruker AVANCE III 800
22	2D AROMATIC 13C NOESY-HSQC	1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide	93% H2O/7% D2O	100 mM NaCl mM	8.0	1016 mbar	298	Bruker AVANCE III 800
23	3D (D2O) H(C)CH-TOCSY	1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide	93% H2O/7% D2O	100 mM NaCl mM	8.0	1016 mbar	298	Bruker AVANCE III 800
24	3D (D2O) (H)CCH-TOCSY	1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide	93% H2O/7% D2O	100 mM NaCl mM	8.0	1016 mbar	298	Bruker AVANCE III 800
25	3D (D2O) 13C NOESY-HSQC	1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide	93% H2O/7% D2O	100 mM NaCl mM	8.0	1016 mbar	298	Bruker AVANCE III 800
26	3D (D2) 15N NOESY-HSQC	1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide	93% H2O/7% D2O	100 mM NaCl mM	8.0	1016 mbar	298	Bruker AVANCE III 800
27	2D 1H-13C HSQC	1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide	93% H2O/7% D2O	100 mM NaCl mM	8.0	1016 mbar	298	Bruker AVANCE III 800
28	2D 1H-15N HSQC	1.5 mM [U-100% 13C; U-100% 15N] XAC2609(311-411), 20 mM TRIS, 100 mM sodium chloride, 0.1 % v/v glycerol, 0.05 % w/v sodium azide	93% H2O/7% D2O	100 mM NaCl mM	8.0	1016 mbar	298	Bruker AVANCE III 800

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III	800

NMR Refinement
Method	Details	Software
simulated annealing		CNS

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	50
Conformers Submitted Total Number	20
Representative Model	1 (closest to the average)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	CNS		Brunger A. T. et.al.
2	structure calculation	ARIA		Linge, O'Donoghue and Nilges
3	chemical shift assignment	CcpNmr Analysis	2.3	CCPN