SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
11D 1H0.7-0.9 mM [U-100% 15N] GTPase KRas, 20 mM [U-2H] MES, 100 mM potassium chloride, 50 mM sodium chloride, 2 mM MgCl2, 1 mM [U-2H] TCEP, 7 mM [U-2H] D2O, 0.05 % sodium azide90% H2O/10% D2O0.15 M6.51 atm298Bruker AVANCE III 700
22D 1H-15N HSQC0.7-0.9 mM [U-100% 15N] GTPase KRas, 20 mM [U-2H] MES, 100 mM potassium chloride, 50 mM sodium chloride, 2 mM MgCl2, 1 mM [U-2H] TCEP, 7 mM [U-2H] D2O, 0.05 % sodium azide90% H2O/10% D2O0.15 M6.51 atm298Bruker AVANCE III 700
32D 1H-13C HSQC aliphatic0.7-0.9 mM [U-13C; U-15N] GTPase KRas, 20 mM [U-2H] MES, 100 mM potassium chloride, 50 mM sodium chloride, 2 mM MgCl2, 1 mM [U-2H] TCEP, 7 mM [U-2H] D2O, 0.05 % sodium azide90% H2O/10% D2O0.15 M6.51 atm298Bruker AVANCE III HD 800
42D 1H-13C HSQC aromatic0.7-0.9 mM [U-13C; U-15N] GTPase KRas, 20 mM [U-2H] MES, 100 mM potassium chloride, 50 mM sodium chloride, 2 mM MgCl2, 1 mM [U-2H] TCEP, 7 mM [U-2H] D2O, 0.05 % sodium azide90% H2O/10% D2O0.15 M6.51 atm298Bruker AVANCE III HD 800
53D 1H-15N TOCSY0.7-0.9 mM [U-100% 15N] GTPase KRas, 20 mM [U-2H] MES, 100 mM potassium chloride, 50 mM sodium chloride, 2 mM MgCl2, 1 mM [U-2H] TCEP, 7 mM [U-2H] D2O, 0.05 % sodium azide90% H2O/10% D2O0.15 M6.51 atm298Bruker AVANCE III 700
153D HNCACB0.7-0.9 mM [U-13C; U-15N] GTPase KRas, 20 mM [U-2H] MES, 100 mM potassium chloride, 50 mM sodium chloride, 2 mM MgCl2, 1 mM [U-2H] TCEP, 7 mM [U-2H] D2O, 0.05 % sodium azide90% H2O/10% D2O0.15 M6.51 atm298Bruker AVANCE III 700
143D CBCA(CO)NH0.7-0.9 mM [U-13C; U-15N] GTPase KRas, 20 mM [U-2H] MES, 100 mM potassium chloride, 50 mM sodium chloride, 2 mM MgCl2, 1 mM [U-2H] TCEP, 7 mM [U-2H] D2O, 0.05 % sodium azide90% H2O/10% D2O0.15 M6.51 atm298Bruker AVANCE III 700
133D HNCA0.7-0.9 mM [U-13C; U-15N] GTPase KRas, 20 mM [U-2H] MES, 100 mM potassium chloride, 50 mM sodium chloride, 2 mM MgCl2, 1 mM [U-2H] TCEP, 7 mM [U-2H] D2O, 0.05 % sodium azide90% H2O/10% D2O0.15 M6.51 atm298Bruker AVANCE III 700
123D HN(CO)CA0.7-0.9 mM [U-13C; U-15N] GTPase KRas, 20 mM [U-2H] MES, 100 mM potassium chloride, 50 mM sodium chloride, 2 mM MgCl2, 1 mM [U-2H] TCEP, 7 mM [U-2H] D2O, 0.05 % sodium azide90% H2O/10% D2O0.15 M6.51 atm298Bruker AVANCE III 700
113D C(CO)NH0.7-0.9 mM [U-13C; U-15N] GTPase KRas, 20 mM [U-2H] MES, 100 mM potassium chloride, 50 mM sodium chloride, 2 mM MgCl2, 1 mM [U-2H] TCEP, 7 mM [U-2H] D2O, 0.05 % sodium azide90% H2O/10% D2O0.15 M6.51 atm298Bruker AVANCE III 700
103D HNCO0.7-0.9 mM [U-13C; U-15N] GTPase KRas, 20 mM [U-2H] MES, 100 mM potassium chloride, 50 mM sodium chloride, 2 mM MgCl2, 1 mM [U-2H] TCEP, 7 mM [U-2H] D2O, 0.05 % sodium azide90% H2O/10% D2O0.15 M6.51 atm298Bruker AVANCE III 700
93D 1H-15N NOESY0.7-0.9 mM [U-13C; U-15N] GTPase KRas, 20 mM [U-2H] MES, 100 mM potassium chloride, 50 mM sodium chloride, 2 mM MgCl2, 1 mM [U-2H] TCEP, 7 mM [U-2H] D2O, 0.05 % sodium azide90% H2O/10% D2O0.15 M6.51 atm298Bruker AVANCE 900
82D 1H-13C HSQC aromatic0.7-0.9 mM [U-13C; U-15N] GTPase KRas, 20 mM [U-2H] MES, 100 mM potassium chloride, 50 mM sodium chloride, 2 mM MgCl2, 1 mM [U-2H] TCEP, 7 mM [U-2H] D2O, 0.05 % sodium azide90% H2O/10% D2O0.15 M6.51 atm298Bruker AVANCE 900
73D 1H-13C NOESY aliphatic0.7-0.9 mM [U-13C; U-15N] GTPase KRas, 20 mM [U-2H] MES, 100 mM potassium chloride, 50 mM sodium chloride, 2 mM MgCl2, 1 mM [U-2H] TCEP, 7 mM [U-2H] D2O, 0.05 % sodium azide90% H2O/10% D2O0.15 M6.51 atm298Bruker AVANCE 900
62D 1H-15N HSQC0.7-0.9 mM [U-13C; U-15N] GTPase KRas, 20 mM [U-2H] MES, 100 mM potassium chloride, 50 mM sodium chloride, 2 mM MgCl2, 1 mM [U-2H] TCEP, 7 mM [U-2H] D2O, 0.05 % sodium azide90% H2O/10% D2O0.15 M6.51 atm298Bruker AVANCE 900
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III HD800
2BrukerAVANCE900
3BrukerAVANCE III700
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsstructures are based on 2140 distance restraints, 138 hydrogen bond restraints as deduced from secondary structure and the tertiary fold detremined using refinement process, and 238 dihedral angle restraintsCYANA
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (target function)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpin4.0Bruker Biospin
5processingNMRPipe10.9Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2chemical shift assignmentCcpNmr Analysis2.4CCPN
3peak pickingPONDEROSALee W, Petit CM, Cornilescu G, Stark JL, Markley JL.
4refinementCYANA3.98.13Guntert, Mumenthaler and Wuthrich
6refinementPONDEROSALee W, Petit CM, Cornilescu G, Stark JL, Markley JL.
7structure calculationCYANA3.98.13Guntert, Mumenthaler and Wuthrich