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Ax2 Domain of VEGF Readthrough Element
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H COSY 100 uM RNA 100% D2O 50 mM 5.6 ambient 311 Bruker Ascend800 800 2 2D 1H-1H NOESY 100 uM RNA 90% H2O/10% D2O 50 mM 5.6 ambient 298 Bruker Ascend800 800
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker Ascend800 800
NMR Refinement Method Details Software molecular dynamics X-PLOR
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 chemical shift assignment NMRViewJ Johnson, Bruce 3 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 4 refinement X-PLOR Schwieters, Kuszewski, Tjandra and Clore