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GsI-IIC RT Template-Switching Complex (twinned)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 6AR3
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 293 Tris-HCl, sodium citrate tribasic dihydrate
Crystal Properties Matthews coefficient Solvent content 2.75 55.21
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 179.38 α = 90 b = 107.415 β = 113.65 c = 71.973 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS3 6M 2018-09-18 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 5.0.1 0.977410 ALS 5.0.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.2 48.79 99.7 0.08 0.086 0.033 0.999 15 6.8 20707
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.2 3.42 99.8 0.581 0.628 0.237 0.949 7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 6AR3 3.2 48.79 18631 2073 99.7 0.276 0.2705 0.2681 0.3241 0.3189 RANDOM 115.561
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -119.13 -90.83 69.39 49.74
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 27.353 r_dihedral_angle_3_deg 14.332 r_dihedral_angle_4_deg 12.136 r_dihedral_angle_1_deg 10.831 r_angle_refined_deg 1.323 r_angle_other_deg 1.201 r_chiral_restr 0.062 r_gen_planes_refined 0.007 r_bond_refined_d 0.006 r_bond_other_d 0.001
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 27.353 r_dihedral_angle_3_deg 14.332 r_dihedral_angle_4_deg 12.136 r_dihedral_angle_1_deg 10.831 r_angle_refined_deg 1.323 r_angle_other_deg 1.201 r_chiral_restr 0.062 r_gen_planes_refined 0.007 r_bond_refined_d 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6898 Nucleic Acid Atoms 1016 Solvent Atoms Heterogen Atoms 77
Software Software Software Name Purpose REFMAC refinement XDS data reduction Aimless data scaling PHASER phasing PDB_EXTRACT data extraction