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Cryo-EM structure of bedaquiline-saturated Mycobacterium smegmatis ATP synthase FO region
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 14 f_angle_d 0.712 f_chiral_restr 0.046 f_bond_d 0.008 f_plane_restr 0.006
Sample FO region of ATP synthase from Mycobacterium smegmatis
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK III Cryogen Name ETHANE-PROPANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 155488 Reported Resolution (Å) 3.4 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 Refinement Space RECIPROCAL Refinement Protocol AB INITIO MODEL Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type FEI FALCON IV (4k x 4k) Electron Dose (electrons/Å**2) 41
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) Maximum Defocus (nm) Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification 75000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version IMAGE ACQUISITION EPU CTF CORRECTION cryoSPARC 2.13 INITIAL EULER ASSIGNMENT cryoSPARC 2.13 FINAL EULER ASSIGNMENT cryoSPARC 2.13 CLASSIFICATION cryoSPARC 2.13 RECONSTRUCTION cryoSPARC 2.13 MODEL REFINEMENT cryoSPARC 2.13 MODEL REFINEMENT PHENIX
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 1825672