☰ Navigation Tabs
Crystal Structure of human FABP4 with active site mutated to that of FABP3 in complex with palmitate
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details other inhouse model
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7 293 protein in 25mM Tris/HCl pH 7.5 100mM NaCl, see also PMID 27658368
Crystal Properties Matthews coefficient Solvent content 2.48 50.33
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 35.757 α = 90 b = 55.819 β = 90 c = 74.734 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL PSI PILATUS 6M 2011-01-28 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA 1.000000 SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.15 44.72 99.5 0.048 0.053 0.999 15.09 6.428 53727 18.615
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.15 1.18 99.5 0.884 0.965 0.782 2 6.25
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT inhouse model 1.15 44.72 47037 2460 91.78 0.1814 0.1797 0.2152 0.2333 RANDOM 15.244
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.19 -0.89 -1.3
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.513 r_sphericity_free 12.989 r_dihedral_angle_4_deg 12.731 r_dihedral_angle_3_deg 11.832 r_sphericity_bonded 6.961 r_dihedral_angle_1_deg 6.242 r_rigid_bond_restr 4.325 r_angle_refined_deg 2.072 r_angle_other_deg 1.024 r_chiral_restr 0.106
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.513 r_sphericity_free 12.989 r_dihedral_angle_4_deg 12.731 r_dihedral_angle_3_deg 11.832 r_sphericity_bonded 6.961 r_dihedral_angle_1_deg 6.242 r_rigid_bond_restr 4.325 r_angle_refined_deg 2.072 r_angle_other_deg 1.024 r_chiral_restr 0.106 r_bond_refined_d 0.021 r_gen_planes_refined 0.01 r_gen_planes_other 0.002 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1044 Nucleic Acid Atoms Solvent Atoms 182 Heterogen Atoms 36
Software Software Software Name Purpose XSCALE data scaling REFMAC refinement PDB_EXTRACT data extraction XDS data reduction PHASER phasing