Experiment: 7EIV

X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP	6.8	291	0.4 M magnesium acetate, 0.1 M HEPES pH 6.8, 2% (v/v) PEG 3350, 2% (v/v) PEG 5000 MME, 2% (v/v) PEG 4000, 2% (v/v) PEG 2000 and 10% ethylene glycol

Crystal Properties
Matthews coefficient	Solvent content
4.47	72.47

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 207.371	α = 90
b = 253.945	β = 90
c = 270.738	γ = 90

Symmetry
Space Group	F 2 2 2

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS PILATUS3 6M		2019-12-07	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	SSRF BEAMLINE BL19U1	0.97918	SSRF	BL19U1

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	Rpim I (All)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.68	50	100	0.084	0.087	0.024	9.4	13.5		99458

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	Rpim I (All)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2.68	2.78	100		0.602	0.627	0.173	0.963		13.1

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work	R-Free	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	SAD	THROUGHOUT	2.68	48.58	94460	4996	99.78	0.2293	0.2282	0.2487	RANDOM	68.394

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.17			-4.98		5.15

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	29.946
r_dihedral_angle_4_deg	15.958
r_dihedral_angle_3_deg	15.268
r_dihedral_angle_1_deg	5.584
r_angle_other_deg	2.285
r_angle_refined_deg	1.21
r_chiral_restr	0.041
r_bond_other_d	0.035
r_gen_planes_other	0.004
r_bond_refined_d	0.003

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	29.946
r_dihedral_angle_4_deg	15.958
r_dihedral_angle_3_deg	15.268
r_dihedral_angle_1_deg	5.584
r_angle_other_deg	2.285
r_angle_refined_deg	1.21
r_chiral_restr	0.041
r_bond_other_d	0.035
r_gen_planes_other	0.004
r_bond_refined_d	0.003
r_gen_planes_refined	0.003

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	13251
Nucleic Acid Atoms
Solvent Atoms	56
Heterogen Atoms	76

Software

Software
Software Name	Purpose
REFMAC	refinement
HKL-2000	data scaling
PDB_EXTRACT	data extraction
HKL-3000	data reduction
CRANK2	phasing

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.