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DgkA structure in E.coli lipid bilayer
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 NCA 0.83 mg/uL 13C_15N no-cys-DgkA, 0.166 mg/uL 13C_15N A24C-DgkA, 0.166 mg/uL 13C_15N A29C-DgkA, 0.166 mg/uL 13C_15N 46C-DgkA, 0.166 mg/uL 13C_15N V79C-DgkA proteoliposome 10 mM 6.6 1 atm 272 Bruker AVANCE III 800 2 DARR 0.83 mg/uL 13C_15N no-cys-DgkA, 0.166 mg/uL 13C_15N A24C-DgkA, 0.166 mg/uL 13C_15N A29C-DgkA, 0.166 mg/uL 13C_15N 46C-DgkA, 0.166 mg/uL 13C_15N V79C-DgkA proteoliposome 10 mM 6.6 1 atm 272 Bruker AVANCE III 800 3 NCACX 0.83 mg/uL 13C_15N no-cys-DgkA, 0.166 mg/uL 13C_15N A24C-DgkA, 0.166 mg/uL 13C_15N A29C-DgkA, 0.166 mg/uL 13C_15N 46C-DgkA, 0.166 mg/uL 13C_15N V79C-DgkA proteoliposome 10 mM 6.6 1 atm 272 Bruker AVANCE III 800 4 CONCA 0.83 mg/uL 13C_15N no-cys-DgkA, 0.166 mg/uL 13C_15N A24C-DgkA, 0.166 mg/uL 13C_15N A29C-DgkA, 0.166 mg/uL 13C_15N 46C-DgkA, 0.166 mg/uL 13C_15N V79C-DgkA proteoliposome 10 mM 6.6 1 atm 272 Bruker AVANCE III 800 5 NCOCX 0.83 mg/uL 13C_15N no-cys-DgkA, 0.166 mg/uL 13C_15N A24C-DgkA, 0.166 mg/uL 13C_15N A29C-DgkA, 0.166 mg/uL 13C_15N 46C-DgkA, 0.166 mg/uL 13C_15N V79C-DgkA proteoliposome 10 mM 6.6 1 atm 272 Bruker AVANCE III 800
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 800
NMR Refinement Method Details Software distance geometry CS-ROSETTA
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 20000 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 chemical shift assignment Sparky Goddard 3 structure calculation CS-ROSETTA Shen, Vernon, Baker and Bax