X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP295MPD
Crystal Properties
Matthews coefficientSolvent content
2.0540.08

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 43.9α = 90
b = 109.2β = 93.1
c = 63.9γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315r2014-04-16MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSSRF BEAMLINE BL17U11.0087SSRFBL17U1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Rrim I (All)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.982099.50.1440.99510.533.7741497
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Rrim I (All)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.982.199.60.9360.7072

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONSADFREE R-VALUE1.98219.67541497209099.5080.1910.1880.248924.754
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-2.054-0.762-1.333.446
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.458
r_dihedral_angle_4_deg20.141
r_dihedral_angle_3_deg16.158
r_dihedral_angle_1_deg5.402
r_lrange_it5.219
r_lrange_other5.218
r_scangle_it4.917
r_scangle_other4.916
r_scbond_it4.184
r_scbond_other4.184
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.458
r_dihedral_angle_4_deg20.141
r_dihedral_angle_3_deg16.158
r_dihedral_angle_1_deg5.402
r_lrange_it5.219
r_lrange_other5.218
r_scangle_it4.917
r_scangle_other4.916
r_scbond_it4.184
r_scbond_other4.184
r_mcangle_it3.818
r_mcangle_other3.817
r_mcbond_it3.307
r_mcbond_other3.307
r_angle_other_deg2.529
r_angle_refined_deg1.73
r_nbd_other0.326
r_symmetry_nbd_other0.228
r_nbd_refined0.218
r_nbtor_refined0.192
r_bond_other_d0.174
r_xyhbond_nbd_refined0.173
r_symmetry_xyhbond_nbd_other0.138
r_symmetry_nbd_refined0.137
r_symmetry_xyhbond_nbd_refined0.115
r_chiral_restr0.107
r_symmetry_nbtor_other0.075
r_gen_planes_refined0.026
r_gen_planes_other0.022
r_bond_refined_d0.014
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms5254
Nucleic Acid Atoms
Solvent Atoms321
Heterogen Atoms60

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
XSCALEdata scaling
CRANK2phasing