☰ Navigation Tabs
Solution NMR structure of DnaX mini intein from Spirulina platensis
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1.0 mM [U-100% 15N] Spl DnaX mini-intein 93% H2O/7% D2O 50 mM 6.5 1 atm 303 Bruker AVANCE III 600 2 2D 1H-15N HSQC 0.7 mM [U-100% 13C; U-100% 15N] Spl DnaX mini-intein 93% H2O/7% D2O 50 mM 6.5 1 atm 303 Bruker AVANCE III 600 3 2D 1H-13C HSQC 0.7 mM [U-100% 13C; U-100% 15N] Spl DnaX mini-intein 93% H2O/7% D2O 50 mM 6.5 1 atm 303 Bruker AVANCE III 600 4 2D 1H-13C HSQC 0.8 mM [U-10% 13C; U-100% 15N] Spl DnaX mini-intein 93% H2O/7% D2O 50 mM 6.5 1 atm 303 Bruker AVANCE III 600 5 3D 1H-15N TOCSY 1.0 mM [U-100% 15N] Spl DnaX mini-intein 93% H2O/7% D2O 50 mM 6.5 1 atm 303 Bruker AVANCE III 600 6 3D 1H-15N TOCSY 0.7 mM [U-100% 13C; U-100% 15N] Spl DnaX mini-intein 93% H2O/7% D2O 50 mM 6.5 1 atm 303 Bruker AVANCE III 600 7 3D CBCA(CO)NH 0.7 mM [U-100% 13C; U-100% 15N] Spl DnaX mini-intein 93% H2O/7% D2O 50 mM 6.5 1 atm 303 Bruker AVANCE III 600 8 3D HNCACB 0.7 mM [U-100% 13C; U-100% 15N] Spl DnaX mini-intein 93% H2O/7% D2O 50 mM 6.5 1 atm 303 Bruker AVANCE III 600 9 3D HNCO 0.7 mM [U-100% 13C; U-100% 15N] Spl DnaX mini-intein 93% H2O/7% D2O 50 mM 6.5 1 atm 303 Bruker AVANCE III 600 10 3D HNCA 0.7 mM [U-100% 13C; U-100% 15N] Spl DnaX mini-intein 93% H2O/7% D2O 50 mM 6.5 1 atm 303 Bruker AVANCE III 600 11 3D HN(CA)CO 0.7 mM [U-100% 13C; U-100% 15N] Spl DnaX mini-intein 93% H2O/7% D2O 50 mM 6.5 1 atm 303 Bruker AVANCE III 600 12 3D C(CO)NH 0.7 mM [U-100% 13C; U-100% 15N] Spl DnaX mini-intein 93% H2O/7% D2O 50 mM 6.5 1 atm 303 Bruker AVANCE III 600 13 3D H(CCO)NH 0.7 mM [U-100% 13C; U-100% 15N] Spl DnaX mini-intein 93% H2O/7% D2O 50 mM 6.5 1 atm 303 Bruker AVANCE III 600 14 3D HBHA(CO)NH 0.7 mM [U-100% 13C; U-100% 15N] Spl DnaX mini-intein 93% H2O/7% D2O 50 mM 6.5 1 atm 303 Bruker AVANCE III 600 15 3D HCCH-TOCSY 0.7 mM [U-100% 13C; U-100% 15N] Spl DnaX mini-intein 93% H2O/7% D2O 50 mM 6.5 1 atm 303 Bruker AVANCE III 600 16 3D 1H-15N NOESY 0.7 mM [U-100% 13C; U-100% 15N] Spl DnaX mini-intein 93% H2O/7% D2O 50 mM 6.5 1 atm 303 Bruker AVANCE III 600 17 3D 1H-13C NOESY 0.7 mM [U-100% 13C; U-100% 15N] Spl DnaX mini-intein 93% H2O/7% D2O 50 mM 6.5 1 atm 303 Bruker AVANCE III 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 600
NMR Refinement Method Details Software Explicit water refined PONDEROSA
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 15 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment NMRFAM-SPARKY Woonghee Lee 2 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 3 structure calculation PONDEROSA Woonghee Lee 4 refinement PONDEROSA Lee, W., Stark, J.L., and Markley, J.L. 5 peak picking NMRFAM-SPARKY Lee, W., Tonelli, M., and Markley, J.L.