6TKF

ChiLob 7/4 H2 HC-C225S KappaLC-C214S F(ab')2


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP293PEG 1000, PEG 3350, MPD, MOPS/HEPES-Na
Crystal Properties
Matthews coefficientSolvent content
3.0359.37

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 149.105α = 90
b = 149.105β = 90
c = 45.804γ = 120
Symmetry
Space GroupP 3 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS 6M2015-11-08MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID23-11.7ESRFID23-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)Rpim I (All)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.18129.1399.90.0940.10.0230.99925.117.330651
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.182.2598.60.7621.87.1

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT6FAX2.1848.85430650149099.8050.1980.19610.239436.965
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.4240.2120.424-1.375
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_other_3_deg45.748
r_dihedral_angle_2_deg34.4
r_dihedral_angle_1_deg20.418
r_dihedral_angle_3_deg14.215
r_dihedral_angle_4_deg11.679
r_lrange_it7.815
r_lrange_other7.692
r_scangle_it5.732
r_scangle_other5.732
r_mcangle_it4.652
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_other_3_deg45.748
r_dihedral_angle_2_deg34.4
r_dihedral_angle_1_deg20.418
r_dihedral_angle_3_deg14.215
r_dihedral_angle_4_deg11.679
r_lrange_it7.815
r_lrange_other7.692
r_scangle_it5.732
r_scangle_other5.732
r_mcangle_it4.652
r_mcangle_other4.635
r_scbond_it3.914
r_scbond_other3.913
r_mcbond_it3.227
r_mcbond_other3.201
r_angle_other_deg2.447
r_angle_refined_deg1.675
r_symmetry_xyhbond_nbd_refined0.29
r_symmetry_nbd_refined0.231
r_symmetry_nbd_other0.216
r_nbd_other0.21
r_nbd_refined0.195
r_xyhbond_nbd_refined0.175
r_nbtor_refined0.164
r_symmetry_nbtor_other0.079
r_chiral_restr0.072
r_bond_other_d0.037
r_bond_refined_d0.01
r_gen_planes_other0.01
r_gen_planes_refined0.008
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3265
Nucleic Acid Atoms
Solvent Atoms248
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
Aimlessdata scaling
MOLREPphasing