6SNJ | pdb_00006snj

Solution structure of the FUS/TLS RNA recognition motif in complex with U1 snRNA stem loop III

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1.2 mM [U-99% 13C; U-99% 15N] FUS/TLS RNA recognition motif (260-390), 1.5 mM SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	90% H2O/10% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE III 600
2	2D 1H-13C HSQC aliphatic	1.2 mM [U-99% 13C; U-99% 15N] FUS/TLS RNA recognition motif (260-390), 1.5 mM SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	90% H2O/10% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE III 600
3	2D 1H-13C HSQC aromatic	1.2 mM [U-99% 13C; U-99% 15N] FUS/TLS RNA recognition motif (260-390), 1.5 mM SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	90% H2O/10% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE III 600
4	2D 1H-13C HSQC aliphatic	1.2 mM [U-99% 13C; U-99% 15N] FUS/TLS RNA recognition motif (260-390), 1.5 mM SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	100% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE III 600
5	2D 1H-13C HSQC aromatic	1.2 mM [U-99% 13C; U-99% 15N] FUS/TLS RNA recognition motif (260-390), 1.5 mM SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	100% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE III 600
14	3D 1H-15N NOESY	1.2 mM [U-99% 13C; U-99% 15N] FUS/TLS RNA recognition motif (260-390), 1.5 mM SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	90% H2O/10% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE 900
13	3D 1H-13C NOESY aliphatic	1.2 mM [U-99% 13C; U-99% 15N] FUS/TLS RNA recognition motif (260-390), 1.5 mM SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	90% H2O/10% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE 900
12	3D 1H-13C NOESY aromatic	1.2 mM [U-99% 13C; U-99% 15N] FUS/TLS RNA recognition motif (260-390), 1.5 mM SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	90% H2O/10% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE 900
11	3D 1H-13C NOESY aliphatic	1.2 mM [U-99% 13C; U-99% 15N] FUS/TLS RNA recognition motif (260-390), 1.5 mM SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	100% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE III 700
10	3D 1H-13C NOESY aromatic	1.2 mM [U-99% 13C; U-99% 15N] FUS/TLS RNA recognition motif (260-390), 1.5 mM SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	100% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE III 700
9	2D 1H-13C HSQC aliphatic	1 mM FUS/TLS RNA recognition motif (260-390), 0.8 mM [U-13C; U-15N] SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	100% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE 900
8	2D 1H-13C HSQC aromatic	1 mM FUS/TLS RNA recognition motif (260-390), 0.8 mM [U-13C; U-15N] SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	100% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE 900
7	3D 1H-13C NOESY	1 mM FUS/TLS RNA recognition motif (260-390), 0.8 mM [U-13C; U-15N] SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	100% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE 900
6	3D HCCH-TOCSY	1 mM FUS/TLS RNA recognition motif (260-390), 0.8 mM [U-13C; U-15N] SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	100% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE III 700
19	3D HNCACB	1.2 mM [U-99% 13C; U-99% 15N] FUS/TLS RNA recognition motif (260-390), 1.5 mM SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	90% H2O/10% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE III 600
18	3D CBCA(CO)NH	1.2 mM [U-99% 13C; U-99% 15N] FUS/TLS RNA recognition motif (260-390), 1.5 mM SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	90% H2O/10% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE III 600
17	3D HNCO	1.2 mM [U-99% 13C; U-99% 15N] FUS/TLS RNA recognition motif (260-390), 1.5 mM SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	90% H2O/10% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE III 600
16	3D HNCA	1.2 mM [U-99% 13C; U-99% 15N] FUS/TLS RNA recognition motif (260-390), 1.5 mM SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	90% H2O/10% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE III 600
15	2D 1H-1H NOESY	1 mM FUS/TLS RNA recognition motif (260-390), 1 mM SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	90% H2O/10% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE 900
22	2D F1FF2f NOESY	1.2 mM [U-99% 13C; U-99% 15N] FUS/TLS RNA recognition motif (260-390), 1.5 mM SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	100% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE III 700
21	2D F2F NOEY	1.2 mM [U-99% 13C; U-99% 15N] FUS/TLS RNA recognition motif (260-390), 1.5 mM SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	100% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE III 700
20	2D F1fF2F TOCSY	1.2 mM [U-99% 13C; U-99% 15N] FUS/TLS RNA recognition motif (260-390), 1.5 mM SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	100% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE III 700
24	3D 1H-13C filtered edited NOESY HSQC	1.2 mM [U-99% 13C; U-99% 15N] FUS/TLS RNA recognition motif (260-390), 1.5 mM SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	100% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE 900
23	3D 1H-13C filtered edited NOESY HSQC	1 mM FUS/TLS RNA recognition motif (260-390), 0.8 mM [U-13C; U-15N] SL3, 10 mM sodium phosphate, 50 mM sodium chloride, 2 mM DTT	100% D2O	60 mM	6.8	atm atm	303	Bruker AVANCE 900

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III	600
2	Bruker	AVANCE III	700
3	Bruker	AVANCE	900

NMR Refinement
Method	Details	Software
simulated annealing		Amber

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	50
Conformers Submitted Total Number	18
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	Amber	12	Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
2	structure calculation	CYANA	3.98	Guntert, Mumenthaler and Wuthrich
3	chemical shift assignment	CARA		Keller and Wuthrich
4	peak picking	CYANA		Guntert, Mumenthaler and Wuthrich