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Structure of kiteplatinated dsDNA
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-13C HSQC aliphatic 1 mM NA- kiteplatin 90% H2O/10% D2O 100 mM 7.0 1 atm 273 Bruker AVANCE III 600 2 2D 1H-1H NOESY 1 mM NA- kiteplatin 90% H2O/10% D2O 100 mM 7.0 1 atm 273 Bruker AVANCE III 950 3 2D DQF-COSY 1 mM NA- kiteplatin 90% H2O/10% D2O 100 mM 7.0 1 atm 298 Bruker AVANCE III 850 5 2D 1H-1H TOCSY 1 mM NA- kiteplatin 90% H2O/10% D2O 100 mM 7.0 1 atm 298 Bruker AVANCE III 850 4 2D 1H-15N HSQC 1 mM NA- kiteplatin 90% H2O/10% D2O 100 mM 7.0 1 atm 298 Bruker AVANCE III 850 6 2D 1H-1H NOESY 1 mM NA- kiteplatin 90% H2O/10% D2O 100 mM 7.0 1 atm 298 Bruker AVANCE III 950 7 2D 1H-15N HSQC 1 mM NA- kiteplatin 90% H2O/10% D2O 100 mM 7.0 1 atm 273 Bruker AVANCE III 850
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 600 2 Bruker AVANCE III 850 3 Bruker AVANCE III 950
NMR Refinement Method Details Software simulated annealing novel force-field for kitePt Amber
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman 2 structure calculation Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman 3 chemical shift assignment Sparky Goddard 4 peak picking Sparky Goddard