6GS5
NMR structure of temporin L in SDS micelles
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-1H TOCSY | 2 mM Temporin L, 100 mM [U-2H] deuterated sodium dodecyl sulphate, 0.05 % w/w 2H 3-(trimethylsilyl)propionic-2,2,3,3-d4 acid | 90% H2O/10% D2O | no salts | 7.0 | 1 atm | 298 | Bruker AVANCE 500 |
| 2 | 2D 1H-1H NOESY | 2 mM Temporin L, 100 mM [U-2H] deuterated sodium dodecyl sulphate, 0.05 % w/w 2H 3-(trimethylsilyl)propionic-2,2,3,3-d4 acid | 90% H2O/10% D2O | no salts | 7.0 | 1 atm | 298 | Bruker AVANCE 500 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 500 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| distance geometry | X-PLOR | |
| simulated annealing | X-PLOR | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 200 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (none) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | processing | TopSpin | Bruker Biospin | |
| 2 | chemical shift assignment | CARA | Keller and Wuthrich | |
| 5 | peak picking | CARA | Keller and Wuthrich | |
| 3 | structure calculation | X-PLOR | Brunger | |
| 4 | refinement | X-PLOR | Brunger | |
