6GS5
NMR structure of temporin L in SDS micelles
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H TOCSY | 2 mM Temporin L, 100 mM [U-2H] deuterated sodium dodecyl sulphate, 0.05 % w/w 2H 3-(trimethylsilyl)propionic-2,2,3,3-d4 acid | 90% H2O/10% D2O | no salts | 7.0 | 1 atm | 298 | Bruker AVANCE 500 |
2 | 2D 1H-1H NOESY | 2 mM Temporin L, 100 mM [U-2H] deuterated sodium dodecyl sulphate, 0.05 % w/w 2H 3-(trimethylsilyl)propionic-2,2,3,3-d4 acid | 90% H2O/10% D2O | no salts | 7.0 | 1 atm | 298 | Bruker AVANCE 500 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 500 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
distance geometry | X-PLOR | |
simulated annealing | X-PLOR |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (none) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | processing | TopSpin | Bruker Biospin | |
2 | chemical shift assignment | CARA | Keller and Wuthrich | |
5 | peak picking | CARA | Keller and Wuthrich | |
3 | structure calculation | X-PLOR | Brunger | |
4 | refinement | X-PLOR | Brunger |