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Heterodimers of FALS mutant SOD enzyme
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1FUN
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 298 2-3 M Ammonium sulfate or Sodium malonate
Crystal Properties Matthews coefficient Solvent content 3.65 66.27
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 162.699 α = 90 b = 201.671 β = 90 c = 143.834 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 mirrors 2013-02-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON AUSTRALIAN SYNCHROTRON BEAMLINE MX1 0.953700 Australian Synchrotron MX1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 47.57 99.9 0.086 25.25 14.2 158995 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.05 98.9 0.871 2.47 13.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1FUN 2 47.57 150990 7971 99.9 0.158 0.156 0.1666 0.19 0.197 RANDOM 38.62
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.38 0.4 -1.78
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.53 r_dihedral_angle_1_deg 19.181 r_dihedral_angle_3_deg 15.406 r_dihedral_angle_4_deg 14.586 r_long_range_B_refined 8.997 r_long_range_B_other 8.817 r_scangle_other 6.243 r_mcangle_other 4.188 r_mcangle_it 4.187 r_scbond_it 3.946
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.53 r_dihedral_angle_1_deg 19.181 r_dihedral_angle_3_deg 15.406 r_dihedral_angle_4_deg 14.586 r_long_range_B_refined 8.997 r_long_range_B_other 8.817 r_scangle_other 6.243 r_mcangle_other 4.188 r_mcangle_it 4.187 r_scbond_it 3.946 r_scbond_other 3.946 r_mcbond_it 2.83 r_mcbond_other 2.829 r_angle_refined_deg 1.361 r_angle_other_deg 1.193 r_chiral_restr 0.166 r_bond_refined_d 0.013 r_gen_planes_refined 0.006 r_gen_planes_other 0.002 r_bond_other_d 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 11297 Nucleic Acid Atoms Solvent Atoms 1356 Heterogen Atoms 27
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling PHASER phasing