HADDOCK structure of the Rous sarcoma virus matrix protein (M-domain) in complex with inositol 1,3,5-trisphosphate

NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC100 uM [U-98% 15N] Matrix protein, 50 mM sodium phosphate, 2 mM TCEP, 1.6 mM IP395% H2O/5% D2O100 M61 atm305Bruker AVANCE II 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE II700
NMR Refinement
torsion angle dynamicsCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (medoid)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2data analysisAnalysisCCPN
3structure calculationHADDOCKBonvin
4geometry optimizationCNSBrunger, Adams, Clore, Gros, Nilges and Read