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Structure of the cis-(Tyr39-Pro40) form of the Human Secreted Ly-6/uPAR Related Protein-1 (SLURP-1)
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.3 mM [U-15N] SLURP-1 95% H2O/5% D2O 10 mM 4.7 AMBIENT bar 310 Bruker AVANCE III 800 2 2D 1H-1H NOESY 0.3 mM [U-15N] SLURP-1 95% H2O/5% D2O 10 mM 4.7 AMBIENT bar 310 Bruker AVANCE III 800 3 3D HNCO 0.3 mM [U-13C; U-15N] SLURP-1 95% H2O/5% D2O 10 mM 4.7 AMBIENT bar 310 Bruker AVANCE III 800 4 3D HNCA 0.3 mM [U-13C; U-15N] SLURP-1 95% H2O/5% D2O 10 mM 4.7 AMBIENT bar 310 Bruker AVANCE 700 5 3D HNCACB 0.3 mM [U-13C; U-15N] SLURP-1 95% H2O/5% D2O 10 mM 4.7 AMBIENT bar 310 Bruker AVANCE III 800 10 3D HN(CO)CA 0.3 mM [U-13C; U-15N] SLURP-1 95% H2O/5% D2O 10 mM 4.7 AMBIENT bar 310 Bruker AVANCE III 800 9 3D 1H-15N TOCSY 0.3 mM [U-15N] SLURP-1 95% H2O/5% D2O 10 mM 4.7 AMBIENT bar 310 Bruker AVANCE 700 8 3D HNHA 0.3 mM [U-15N] SLURP-1 95% H2O/5% D2O 10 mM 4.7 AMBIENT bar 310 Bruker AVANCE III 800 7 3D HCCH-TOCSY 0.3 mM [U-13C; U-15N] SLURP-1 100% D2O 10 mM 4.7 AMBIENT bar 310 Bruker AVANCE 700 6 2D 1H-13C HSQC 0.3 mM [U-13C; U-15N] SLURP-1 100% D2O 10 mM 4.7 AMBIENT bar 310 Bruker AVANCE 700
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 800 2 Bruker AVANCE 700
NMR Refinement Method Details Software torsion angle dynamics CYANA
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (target function)
Computation: NMR Software # Classification Version Software Name Author 1 structure calculation CYANA 3.98.13 Guntert, Mumenthaler and Wuthrich 2 chemical shift assignment CARA 1.8 Keller and Wuthrich 3 collection TopSpin Bruker Biospin 4 processing MddNMR V. Orekhov, V. Jaravine, M. Mayzel, K. Kazimierczuk, Swedish NMR Center, University of Gothenburg 5 peak picking CARA Keller and Wuthrich