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Structure of Chloroflexus aggregans flavin based fluorescent protein (CagFbFP) Q148K variant (no morpholine)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 6YX4
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 295 0.5M Ammonium Sulfate, 0.1M tri-Sodium citrate, pH 6.5, 1M Lithium sulfate
Crystal Properties Matthews coefficient Solvent content 2.53 51.38
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 57.772 α = 90 b = 110.839 β = 90 c = 39.197 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M-F 2018-02-19 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 0.9737 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.5 39.993 86.6 0.999 14.8 5.6 35712
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.5 1.539 59.9 0.881 2.9 5.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 6YX4 1.5 39.9 34107 1756 87.12 0.1754 0.174 0.1738 0.202 0.2023 RANDOM 14.357
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.19 0.03 0.16
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.461 r_dihedral_angle_4_deg 12.459 r_dihedral_angle_3_deg 10.91 r_dihedral_angle_1_deg 6.63 r_angle_refined_deg 1.329 r_angle_other_deg 1.301 r_chiral_restr 0.051 r_bond_refined_d 0.005 r_gen_planes_refined 0.005 r_bond_other_d
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.461 r_dihedral_angle_4_deg 12.459 r_dihedral_angle_3_deg 10.91 r_dihedral_angle_1_deg 6.63 r_angle_refined_deg 1.329 r_angle_other_deg 1.301 r_chiral_restr 0.051 r_bond_refined_d 0.005 r_gen_planes_refined 0.005 r_bond_other_d r_gen_planes_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1589 Nucleic Acid Atoms Solvent Atoms 351 Heterogen Atoms 72
Software Software Software Name Purpose Aimless data scaling REFMAC refinement PDB_EXTRACT data extraction XDS data reduction MOLREP phasing