6YW8 | pdb_00006yw8

NMR solution structure of unbound recombinant human Nerve Growth Factor (rhNGF)

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
2	2D 1H-15N HSQC	0.1 mM [U-99% 15N] Nerve Growth Factor, 50 mM HEPES	90% H2O/10% D2O	50 mM	7	1 atm	303	Agilent VNMRS 800
3	3D 1H-15N NOESY	0.1 mM [U-99% 15N] Nerve Growth Factor, 50 mM HEPES	90% H2O/10% D2O	50 mM	7	1 atm	303	Agilent VNMRS 800
1	3D HNCA	0.1 mM [U-99% 13C; U-99% 15N] Nerve Growth Factor, 50 mM HEPES	90% H2O/10% D2O	50 mM	7	1 atm	303	Agilent VNMRS 800
4	2D 1H-13C HSQC aliphatic	0.1 mM [U-99% 13C; U-99% 15N] Nerve Growth Factor, 50 mM HEPES	90% H2O/10% D2O	50 mM	7	1 atm	303	Agilent VNMRS 800
5	3D 1H-13C NOESY aliphatic	0.1 mM [U-99% 13C; U-99% 15N] Nerve Growth Factor, 50 mM HEPES	90% H2O/10% D2O	50 mM	7	1 atm	303	Agilent VNMRS 800

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Agilent	VNMRS	800

NMR Refinement
Method	Details	Software
simulated annealing		ARIA

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	200
Conformers Submitted Total Number	20
Representative Model	1 (medoid)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	ARIA	2.3.2	Rieping W., Habeck M., Bardiaux B., Bernard A., Malliavin T.E., Nilges M.
2	structure calculation	ARIA	2.3.2	Rieping W., Habeck M., Bardiaux B., Bernard A., Malliavin T.E., Nilges M.
3	data analysis	CARA		Keller and Wuthrich
4	peak picking	CARA		Keller and Wuthrich
5	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax