6YP5 | pdb_00006yp5

Solution NMR structure of the oligomerization domain of respiratory syncytial virus phosphoprotein


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC600 uM [U-13C; U-15N] Phosphoprotein(127-163), 20 mM sodium phosphate, 100 mM sodium chloride93% H2O/7% D2O133 mM6.51 atm298Bruker AVANCE III 600
23D HNCA600 uM [U-13C; U-15N] Phosphoprotein(127-163), 20 mM sodium phosphate, 100 mM sodium chloride93% H2O/7% D2O133 mM6.51 atm298Bruker AVANCE III 600
33D HN(CO)CA600 uM [U-13C; U-15N] Phosphoprotein(127-163), 20 mM sodium phosphate, 100 mM sodium chloride93% H2O/7% D2O133 mM6.51 atm298Bruker AVANCE III 600
43D HNCACB600 uM [U-13C; U-15N] Phosphoprotein(127-163), 20 mM sodium phosphate, 100 mM sodium chloride93% H2O/7% D2O133 mM6.51 atm298Bruker AVANCE III 600
53D HNCO600 uM [U-13C; U-15N] Phosphoprotein(127-163), 20 mM sodium phosphate, 100 mM sodium chloride93% H2O/7% D2O133 mM6.51 atm298Bruker AVANCE III 600
133D HN(COCA)CB600 uM [U-13C; U-15N] Phosphoprotein(127-163), 20 mM sodium phosphate, 100 mM sodium chloride93% H2O/7% D2O133 mM6.51 atm298Bruker AVANCE III 600
123D HBHA(CO)NH600 uM [U-13C; U-15N] Phosphoprotein(127-163), 20 mM sodium phosphate, 100 mM sodium chloride93% H2O/7% D2O133 mM6.51 atm298Bruker AVANCE III 600
113D CBCA(CO)NH600 uM [U-13C; U-15N] Phosphoprotein(127-163), 20 mM sodium phosphate, 100 mM sodium chloride93% H2O/7% D2O133 mM6.51 atm298Bruker AVANCE III 600
103D HCCH-TOCSY600 uM [U-13C; U-15N] Phosphoprotein(127-163), 20 mM sodium phosphate, 100 mM sodium chloride100% D2O133 mM6.51 atm298Bruker AVANCE III 800
92D 1H-15N HSQC600 uM [U-13C; U-15N] Phosphoprotein(127-163), 20 mM sodium phosphate, 100 mM sodium chloride100% D2O133 mM6.51 atm298Bruker AVANCE III 800
82D 1H-13C HSQC600 uM [U-13C; U-15N] Phosphoprotein(127-163), 20 mM sodium phosphate, 100 mM sodium chloride100% D2O133 mM6.51 atm298Bruker AVANCE III 800
72D 1H-15N HSQC600 uM [U-13C; U-15N] Phosphoprotein(127-163), 20 mM sodium phosphate, 100 mM sodium chloride93% H2O/7% D2O133 mM6.51 atm298Bruker AVANCE III 950
62D 1H-13C HSQC600 uM [U-13C; U-15N] Phosphoprotein(127-163), 20 mM sodium phosphate, 100 mM sodium chloride93% H2O/7% D2O133 mM6.51 atm298Bruker AVANCE III 950
173D 1H-15N NOESY-HSQC600 uM [U-13C; U-15N] Phosphoprotein(127-163), 20 mM sodium phosphate, 100 mM sodium chloride93% H2O/7% D2O133 mM6.51 atm298Bruker AVANCE III 950
161D 1H600 uM [U-13C; U-15N] Phosphoprotein(127-163), 20 mM sodium phosphate, 100 mM sodium chloride100% D2O133 mM6.51 atm298Bruker AVANCE III 950
152D 1H-13C HSQC600 uM [U-13C; U-15N] Phosphoprotein(127-163), 20 mM sodium phosphate, 100 mM sodium chloride100% D2O133 mM6.51 atm298Bruker AVANCE III 950
143D 1H-13C NOESY600 uM [U-13C; U-15N] Phosphoprotein(127-163), 20 mM sodium phosphate, 100 mM sodium chloride100% D2O133 mM6.51 atm298Bruker AVANCE III 950
202D 1H-13C HSQC300 uM [U-13C; U-15N] Phosphoprotein(127-163), 300 uM Phosphoprotein(127-163), 20 mM sodium phosphate, 100 mM sodium chloride100% D2O133 mM6.51 atm298Bruker AVANCE III 950
191H-13C NOESY-HSQC with 13C/15N filter in F1300 uM [U-13C; U-15N] Phosphoprotein(127-163), 300 uM Phosphoprotein(127-163), 20 mM sodium phosphate, 100 mM sodium chloride100% D2O133 mM6.51 atm298Bruker AVANCE III 950
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III600
2BrukerAVANCE III800
3BrukerAVANCE III950
NMR Refinement
MethodDetailsSoftware
simulated annealingARIA
NMR Ensemble Information
Conformer Selection Criteriaall calculated structures submitted
Conformers Calculated Total Number20
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementARIA2.3Linge, O'Donoghue and Nilges
2structure calculationARIA2.3Linge, O'Donoghue and Nilges
3chemical shift assignmentCcpNmr Analysis2.4CCPN
4peak pickingCcpNmr Analysis2.4CCPN
5data analysisTALOS-N4.21Shen and Bax