6YE5 | pdb_00006ye5

Structure of ribosomal binding factor A RbfA of Staphylococcus aureus bacterium by NMR

SOLUTION NMR

---

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	3D HNHA	0.9 mM [U-99% 15N] ribosome Binding Factor A	95% H2O/5% D2O	0	7.4	1 atm	308	Bruker AVANCE III 700
2	3D HNHB	0.9 mM [U-99% 15N] ribosome Binding Factor A	95% H2O/5% D2O	0	7.4	1 atm	308	Bruker AVANCE III 700
3	3D 1H-15N TOCSY	0.9 mM [U-99% 15N] ribosome Binding Factor A	95% H2O/5% D2O	0	7.4	1 atm	308	Bruker AVANCE III 700
4	3D HNCA	1.7 mM [U-99% 13C; U-99% 15N] ribosome Binding Factor A	95% H2O/5% D2O	0	7.4	1 atm	308	Bruker AVANCE III 700
5	3D HNCACB	1.7 mM [U-99% 13C; U-99% 15N] ribosome Binding Factor A	95% H2O/5% D2O	0	7.4	1 atm	308	Bruker AVANCE III 700
12	3D CBCA(CO)NH	1.7 mM [U-99% 13C; U-99% 15N] ribosome Binding Factor A	95% H2O/5% D2O	0	7.4	1 atm	308	Bruker AVANCE III 700
11	3D HNCO	1.7 mM [U-99% 13C; U-99% 15N] ribosome Binding Factor A	95% H2O/5% D2O	0	7.4	1 atm	308	Bruker AVANCE III 700
10	3D C(CO)NH	1.7 mM [U-99% 13C; U-99% 15N] ribosome Binding Factor A	95% H2O/5% D2O	0	7.4	1 atm	308	Bruker AVANCE III 700
9	3D HN(CO)CA	1.7 mM [U-99% 13C; U-99% 15N] ribosome Binding Factor A	95% H2O/5% D2O	0	7.4	1 atm	308	Bruker AVANCE III 700
8	2D 1H-13C HSQC	1.7 mM [U-99% 13C; U-99% 15N] ribosome Binding Factor A	95% H2O/5% D2O	0	7.4	1 atm	308	Bruker AVANCE III 700
7	2D 1H-15N HSQC	0.9 mM [U-99% 15N] ribosome Binding Factor A	95% H2O/5% D2O	0	7.4	1 atm	308	Bruker AVANCE III 700
6	3D 1H-15N NOESY	1.7 mM [U-99% 13C; U-99% 15N] ribosome Binding Factor A	95% H2O/5% D2O	0	7.4	1 atm	308	Bruker AVANCE III 700
13	2D 1H-1H NOESY	0.9 mM [U-99% 15N] ribosome Binding Factor A	95% H2O/5% D2O	0	7.4	1 atm	308	Bruker AVANCE III 700
14	3D 1H-13C NOESY aliphatic	1.7 mM [U-99% 13C; U-99% 15N] ribosome Binding Factor A	95% H2O/5% D2O	0	7.4	1 atm	308	Bruker AVANCE III 700

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III	700

NMR Refinement
Method	Details	Software
molecular dynamics		X-PLOR NIH

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	1000
Conformers Submitted Total Number	10
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	chemical shift assignment	CNS		Brunger A. T. et.al.
2	structure calculation	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore
3	data analysis	TALOS		Cornilescu, Delaglio and Bax
4	processing	TopSpin	3.5	Bruker Biospin