6XMN

Solution NMR CXCL8-CXCR1 N-domain complex structure


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.4 mM [U-13C; U-15N] CXCL8, 1.2 mM CXCR1, 50 mM sodium phosphate, 0.01 % sodium azide, 10 % [U-100% 2H] D2O90% H2O/10% D2O50 mM6.01 bar303Bruker AVANCE III 800
22D 1H-13C HSQC0.4 mM [U-13C; U-15N] CXCL8, 1.2 mM CXCR1, 50 mM sodium phosphate, 0.01 % sodium azide, 10 % [U-100% 2H] D2O90% H2O/10% D2O50 mM6.01 bar303Bruker AVANCE III 800
33D CBCA(CO)NH0.4 mM [U-13C; U-15N] CXCL8, 1.2 mM CXCR1, 50 mM sodium phosphate, 0.01 % sodium azide, 10 % [U-100% 2H] D2O90% H2O/10% D2O50 mM6.01 bar303Bruker AVANCE III 800
43D HNCACB0.4 mM [U-13C; U-15N] CXCL8, 1.2 mM CXCR1, 50 mM sodium phosphate, 0.01 % sodium azide, 10 % [U-100% 2H] D2O90% H2O/10% D2O50 mM6.01 bar303Bruker AVANCE III 800
53D C(CO)NH0.4 mM [U-13C; U-15N] CXCL8, 1.2 mM CXCR1, 50 mM sodium phosphate, 0.01 % sodium azide, 10 % [U-100% 2H] D2O90% H2O/10% D2O50 mM6.01 bar303Bruker AVANCE III 800
63D HBHA(CO)NH0.4 mM [U-13C; U-15N] CXCL8, 1.2 mM CXCR1, 50 mM sodium phosphate, 0.01 % sodium azide, 10 % [U-100% 2H] D2O90% H2O/10% D2O50 mM6.01 bar303Bruker AVANCE III 750
73D HCCH-TOCSY0.4 mM [U-13C; U-15N] CXCL8, 1.2 mM CXCR1, 50 mM sodium phosphate, 0.01 % sodium azide, 10 % [U-100% 2H] D2O90% H2O/10% D2O50 mM6.01 bar303Bruker AVANCE III 750
83D 1H-15N NOESY0.4 mM [U-13C; U-15N] CXCL8, 1.2 mM CXCR1, 50 mM sodium phosphate, 0.01 % sodium azide, 10 % [U-100% 2H] D2O90% H2O/10% D2O50 mM6.01 bar303Bruker AVANCE III 800
93D 1H-13C NOESY0.4 mM [U-13C; U-15N] CXCL8, 1.2 mM CXCR1, 50 mM sodium phosphate, 0.01 % sodium azide, 10 % [U-100% 2H] D2O90% H2O/10% D2O50 mM6.01 bar303Bruker AVANCE III 750
103D 13C-filter NOESY0.4 mM [U-13C; U-15N] CXCL8, 1.2 mM CXCR1, 50 mM sodium phosphate, 0.01 % sodium azide, 10 % [U-100% 2H] D2O90% H2O/10% D2O50 mM6.01 bar303Bruker AVANCE III 800
112D 1H-15N HSQC1.2 mM CXCL8, 0.5 mM [U-13C; U-15N] CXCR1, 50 mM sodium phosphate, 0.01 % sodium azide, 10 % [U-100% 2H] D2O90% H2O/10% D2O50 mM6.01 bar303Bruker AVANCE III 800
122D 1H-13C HSQC1.2 mM CXCL8, 0.5 mM [U-13C; U-15N] CXCR1, 50 mM sodium phosphate, 0.01 % sodium azide, 10 % [U-100% 2H] D2O90% H2O/10% D2O50 mM6.01 bar303Bruker AVANCE III 800
133D CBCA(CO)NH1.2 mM CXCL8, 0.5 mM [U-13C; U-15N] CXCR1, 50 mM sodium phosphate, 0.01 % sodium azide, 10 % [U-100% 2H] D2O90% H2O/10% D2O50 mM6.01 bar303Bruker AVANCE III 800
143D HNCACB1.2 mM CXCL8, 0.5 mM [U-13C; U-15N] CXCR1, 50 mM sodium phosphate, 0.01 % sodium azide, 10 % [U-100% 2H] D2O90% H2O/10% D2O50 mM6.01 bar303Bruker AVANCE III 800
153D C(CO)NH1.2 mM CXCL8, 0.5 mM [U-13C; U-15N] CXCR1, 50 mM sodium phosphate, 0.01 % sodium azide, 10 % [U-100% 2H] D2O90% H2O/10% D2O50 mM6.01 bar303Bruker AVANCE III 800
163D HBHA(CO)NH1.2 mM CXCL8, 0.5 mM [U-13C; U-15N] CXCR1, 50 mM sodium phosphate, 0.01 % sodium azide, 10 % [U-100% 2H] D2O90% H2O/10% D2O50 mM6.01 bar303Bruker AVANCE III 750
173D HCCH-TOCSY1.2 mM CXCL8, 0.5 mM [U-13C; U-15N] CXCR1, 50 mM sodium phosphate, 0.01 % sodium azide, 10 % [U-100% 2H] D2O90% H2O/10% D2O50 mM6.01 bar303Bruker AVANCE III 750
183D 1H-15N NOESY1.2 mM CXCL8, 0.5 mM [U-13C; U-15N] CXCR1, 50 mM sodium phosphate, 0.01 % sodium azide, 10 % [U-100% 2H] D2O90% H2O/10% D2O50 mM6.01 bar303Bruker AVANCE III 800
193D 1H-13C NOESY1.2 mM CXCL8, 0.5 mM [U-13C; U-15N] CXCR1, 50 mM sodium phosphate, 0.01 % sodium azide, 10 % [U-100% 2H] D2O90% H2O/10% D2O50 mM6.01 bar303Bruker AVANCE III 750
203D 13C-filter NOESY1.2 mM CXCL8, 0.5 mM [U-13C; U-15N] CXCR1, 50 mM sodium phosphate, 0.01 % sodium azide, 10 % [U-100% 2H] D2O90% H2O/10% D2O50 mM6.01 bar303Bruker AVANCE III 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III800
2BrukerAVANCE III750
NMR Refinement
MethodDetailsSoftware
simulated annealingARIA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number30
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentSparkyGoddard
2refinementARIALinge, O'Donoghue and Nilges
3collectionTopSpinBruker Biospin
4processingTopSpinBruker Biospin
5structure calculationARIALinge, O'Donoghue and Nilges