Structure of the C-terminal domain of BCL-XL in membrane
SOLUTION NMR - SOLID-STATE NMR
NMR Experiment |
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
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1 | 2D 1H-15N HSQC | 0.2 mM [U-99% 15N] C-terminal domain of BCL-XL | 90% H2O/10% D2O | 200 mM | 6.5 | 1 bar | 318 | Bruker AVANCE 600 |
2 | 3D HNCACB | 0.2 mM [U-99% 13C; U-99% 15N] C-terminal domain of BCL-XL | 90% H2O/10% D2O | 200 mM | 6.5 | 1 bar | 318 | Bruker AVANCE 600 |
3 | 3D H(CCO)NH | 0.2 mM [U-99% 13C; U-99% 15N] C-terminal domain of BCL-XL | 90% H2O/10% D2O | 200 mM | 6.5 | 1 bar | 318 | Bruker AVANCE 600 |
4 | 2D SLF | 4 mg/mL selectively 15N Leu labeled C-terminal domain of BCL-XL | 95% H2O/5% D2O | 200 mM | 6.5 | 1 bar | 318 | Bruker AVANCE 700 |
5 | 2D SLF | 10 mg/mL selectively 15N Leu labeled C-terminal domain of BCL-XL | 95% H2O/5% D2O | 200 mM | 6.5 | 1 bar | 318 | Bruker AVANCE 500 |
NMR Spectrometer Information |
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Spectrometer | Manufacturer | Model | Field Strength |
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1 | Bruker | AVANCE | 600 |
2 | Bruker | AVANCE | 500 |
3 | Bruker | AVANCE | 700 |
NMR Refinement |
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Method | Details | Software |
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simulated annealing | | X-PLOR NIH |
NMR Ensemble Information |
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Conformer Selection Criteria | structures with the lowest energy |
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Conformers Calculated Total Number | 100 |
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Conformers Submitted Total Number | 10 |
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Representative Model | 1 (lowest energy) |
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Computation: NMR Software |
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# | Classification | Version | Software Name | Author |
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1 | processing | NMRPipe | | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax |
2 | data analysis | NMRView | | Johnson, One Moon Scientific |
3 | chemical shift assignment | NMRView | | Johnson, One Moon Scientific |
4 | structure calculation | X-PLOR NIH | | Schwieters, Kuszewski, Tjandra and Clore |
5 | refinement | X-PLOR NIH | | Schwieters, Kuszewski, Tjandra and Clore |