6VU1

Cap3G-TAR-F1 is an RNA hairpin. The 1H-1H NOESY data was collected at 308 K in 10 mM KH2PO4 pH 7.4.


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H NOESY150 uM Fully protonated Cap3G-TAR-F1, 10 mM Deuterated KH2PO4100% D2O10 mM7.41 atm308Bruker AVANCE 600
22D 1H-1H NOESY150 uM Fully protonated Cap3G-TAR-F1, 10 mM Deuterated KH2PO4100% D2O10 mM7.41 atm308Bruker AVANCE 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
simulated annealingdistance geometry, molecular dynamicsAmber
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number20
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementAmberCase, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, and Kollman
7refinementCYANAGuntert, Mumenthaler and Wuthrich
2structure calculationCYANAGuntert, Mumenthaler and Wuthrich
3chemical shift assignmentNMRViewJohnson, One Moon Scientific
4peak pickingNMRViewJohnson, One Moon Scientific
5processingNMRFxJohnson, One Moon Scientific
6data analysisNMRViewJohnson, One Moon Scientific