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ClpP1P2 complex from M. tuberculosis with GLF-CMK bound to ClpP1
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 5DZK
Sample ClpP1P2 complex bound to GLF-CMK
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK III Cryogen Name ETHANE-PROPANE Sample Vitrification Details Blotted for 4.5 seconds at an offset of -5 mm
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 143748 Reported Resolution (Å) 3.5 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C7
Map-Model Fitting and Refinement Id 1 (5DZK) Refinement Space REAL Refinement Protocol RIGID BODY FIT Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type FEI FALCON III (4k x 4k) Electron Dose (electrons/Å**2) 43
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model TFS KRIOS Minimum Defocus (nm) 700 Maximum Defocus (nm) 2000 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification 75000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION cryoSPARC 2.10 IMAGE ACQUISITION EPU CTF CORRECTION cryoSPARC 2.10 MODEL FITTING UCSF Chimera MODEL REFINEMENT RosettaEM MODEL REFINEMENT PHENIX INITIAL EULER ASSIGNMENT cryoSPARC 2.10 FINAL EULER ASSIGNMENT cryoSPARC 2.10 CLASSIFICATION cryoSPARC 2.10 RECONSTRUCTION cryoSPARC 2.10
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 257060