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EROS3 RDC and NOE Derived Ubiquitin Ensemble
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.9 mM [U-100% 13C; U-100% 15N] Ubiquitin 90% H2O/10% D2O 50 mM 6.5 1 atm 308 Bruker AVANCE DRX 600 2 2D 1H-15N HSQC 0.9 mM [U-100% 13C; U-100% 15N] Ubiquitin 90% H2O/10% D2O 50 mM 6.5 1 atm 308 Bruker AVANCE DRX 700 3 2D 1H-15N HSQC 0.9 mM [U-100% 13C; U-100% 15N] Ubiquitin 90% H2O/10% D2O 50 mM 6.5 1 atm 308 Bruker AVANCE DRX 800
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE DRX 600 2 Bruker AVANCE DRX 700 3 Bruker AVANCE DRX 800
NMR Refinement Method Details Software molecular dynamics GROMACS
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 800 Conformers Submitted Total Number 176 Representative Model 1 (first structure)
Computation: NMR Software # Classification Version Software Name Author 2 chemical shift assignment CYANA Guntert, Mumenthaler and Wuthrich 1 refinement GROMACS Lindahl, van der Spoel, Hess, Abraham