6V1W | pdb_00006v1w

NMR Structure of C-terminal Domain of phi29 ATPase

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	3D 15N NOESY-HSQC	1 uM [U-15N] protein, 50 mM MES	90% H2O/10% D2O	0 mM	6.0	1013 mbar	303	Bruker AVANCE III 750
2	3D 13C-edited NOESY-HSQC aliphatic	1 uM [U-13C] protein, 50 mM [U-2H] MES	99.9% D2O	0 mM	6.0	1013 mbar	303	Bruker AVANCE III 750
3	3D 13C-editied NOESY-HSQC aromatic	1 uM [U-13C] protein, 50 mM [U-2H] MES	99.9% D2O	0 mM	6.0	1013 mbar	303	Bruker AVANCE III 750
4	3D HSQC-NOESY-HSQC	1 uM [U-13C] protein, 50 mM [U-2H] MES	99.9% D2O	0 mM	6.0	1013 mbar	303	Bruker AVANCE III 750
5	HD-exchange	1 uM [U-15N] protein, 50 mM MES	90% H2O/10% D2O	0 mM	6.0	1013 mbar	303	Bruker AVANCE III 750
6	3D HNCA	1 uM U-15N, U-13C protein, 50 mM MES	90% H2O/10% D2O	0 mM	6.0	1013 mbar	303	Bruker AVANCE III 600
7	3D HNCACB	1 uM U-15N, U-13C protein, 50 mM MES	90% H2O/10% D2O	0 mM	6.0	1013 mbar	303	Bruker AVANCE III 600
8	3D CBCA(CO)NH	1 uM U-15N, U-13C protein, 50 mM MES	90% H2O/10% D2O	0 mM	6.0	1013 mbar	303	Bruker AVANCE III 800
12	3D HNCO	1 uM U-15N, U-13C protein, 50 mM MES	90% H2O/10% D2O	0 mM	6.0	1013 mbar	303	Bruker AVANCE III 800
9	3D 1H-15N TOCSY	1 uM [U-15N] protein, 50 mM MES	90% H2O/10% D2O	0 mM	6.0	1013 mbar	303	Bruker AVANCE III 750
10	3D HCCH-TOCSY	1 uM [U-13C] protein, 50 mM [U-2H] MES	99.9% D2O	0 mM	6.0	1013 mbar	303	Bruker AVANCE III 800
11	3D HCCH-TOCSY	1 uM [U-13C] protein, 50 mM [U-2H] MES	99.9% D2O	0 mM	6.0	1013 mbar	303	Bruker AVANCE III 750

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III	750
2	Bruker	AVANCE III	600
3	Bruker	AVANCE III	800

NMR Refinement
Method	Details	Software
simulated annealing		X-PLOR NIH

NMR Ensemble Information
Conformer Selection Criteria	Lowest total energy and zero NOE violations
Conformers Calculated Total Number	50
Conformers Submitted Total Number	15
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	TopSpin	3.2	Bruker Biospin
2	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3	data analysis	NMRView	9.2.0	Johnson, One Moon Scientific
6	chemical shift calculation	TALOS-N		Cornilescu, Delaglio and Bax
4	refinement	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore
5	structure calculation	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore