6UCX

S2 symmetric peptide design number 1, Wednesday


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP52983.2 M ammonium sulfate, 0.1 M citrate pH 5.0
Crystal Properties
Matthews coefficientSolvent content
1.5420.17

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 12.58α = 90
b = 29.81β = 94.21
c = 15.26γ = 90
Symmetry
Space GroupP 1 21/c 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS 6M-F2017-07-18MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 24-ID-C0.8856APS24-ID-C

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
10.8514.982.40.040.0440.99922.816.25179897.475
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
10.850.87280.140.1710.9875.282.724

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONAB INITIO PHASINGTHROUGHOUT0.8514.97989799800.07620.085RANDOM
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
s_zero_chiral_vol0.137
s_non_zero_chiral_vol0.11
s_bond_d0.02
s_angle_d
s_similar_dist
s_from_restr_planes
s_anti_bump_dis_restr
s_rigid_bond_adp_cmpnt
s_similar_adp_cmpnt
s_approx_iso_adps
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms64
Nucleic Acid Atoms
Solvent Atoms2
Heterogen Atoms14

Software

Software
Software NamePurpose
SHELXTrefinement
XDSdata reduction
XSCALEdata scaling
PDB_EXTRACTdata extraction
SHELXTphasing