6UBY

Isolated cofilin bound to an actin filament


ELECTRON MICROSCOPY

Starting Model(s)

Initial Refinement Model(s)
TypeSourceAccession CodeDetails
experimental modelPDB 6DJO 
experimental modelPDB 5YU8 
Sample
Complex of rabbit skeletal actin with isolated, bound human cofilin-1
Sample Components
Rabbit Skeletal Actin
Human Cofilin-1
Specimen Preparation
Sample Aggregation StateHELICAL ARRAY
Vitrification InstrumentHOMEMADE PLUNGER
Cryogen NameETHANE
Sample Vitrification Details
3D Reconstruction
Reconstruction MethodSINGLE PARTICLE
Number of Particles8917
Reported Resolution (Å)7.5
Resolution MethodFSC 0.143 CUT-OFF
Other DetailsFilament segments with isolated, bound cofilin were split into even and odd halves for FSC calculations.
Refinement Type
Symmetry TypePOINT
Map-Model Fitting and Refinement
Id1 (6DJO, 5YU8)
Refinement Space
Refinement Protocol
Refinement Target
Overall B Value
Fitting Procedure
Details
Data Acquisition
Detector TypeGATAN K2 SUMMIT (4k x 4k)
Electron Dose (electrons/Å**2)50
Imaging Experiment1
Date of Experiment
Temperature (Kelvin)
Microscope ModelFEI TITAN KRIOS
Minimum Defocus (nm)
Maximum Defocus (nm)
Minimum Tilt Angle (degrees)
Maximum Tilt Angle (degrees)
Nominal CS
Imaging ModeBRIGHT FIELD
Specimen Holder Model
Nominal Magnification
Calibrated Magnification
SourceFIELD EMISSION GUN
Acceleration Voltage (kV)300
Imaging Details
EM Software
TaskSoftware PackageVersion
MODEL FITTINGUCSF Chimera
Image Processing
CTF Correction TypeCTF Correction DetailsNumber of Particles SelectedParticle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION1117338Both bare and cofilin-decorated segments were selected and initially refined together.