6TWG
Solution structure of antimicrobial peptide, crabrolin Plus in the presence of Lipopolysaccharide
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 0.87 mM Crabrolin Plus, mutant of Crabrolin peptide, 14.6 uM Lipopolysaccharide | 95% H2O/5% D2O | 125 mM | 6.1 | 760 mmHg | 300 | Bruker AVANCE 600 |
2 | 2D TOCSY | 0.87 mM Crabrolin Plus, mutant of Crabrolin peptide, 14.6 uM Lipopolysaccharide | 95% H2O/5% D2O | 125 mM | 6.1 | 760 mmHg | 300 | Bruker AVANCE 600 |
3 | 2D 1H-13C HSQC | 0.87 mM Crabrolin Plus, mutant of Crabrolin peptide, 14.6 uM Lipopolysaccharide | 95% H2O/5% D2O | 125 mM | 6.1 | 760 mmHg | 300 | Bruker AVANCE 600 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
NMR Refinement | ||
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Method | Details | Software |
na |
NMR Ensemble Information | |
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Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (target function) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
6 | data analysis | CARA | Keller and Wuthrich | |
8 | structure calculation | CYANA | Guntert, Mumenthaler and Wuthrich | |
3 | chemical shift assignment | Sparky | Goddard |