6TT8

Haddock model of NDM-1/morin complex


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC320 uM [U-13C; U-15N] NDM-1, 1280 uM morin, 0.1 mM Bis-tris, 150 mM sodium chloride, 2.5 % DMSO90% H2O/10% D2O150 mM7.01 atm293Bruker AVANCE III 800
22D 1H-15N HSQC320 uM [U-13C; U-15N] NDM-1, 1280 uM morin, 0.1 mM Bis-tris, 150 mM sodium chloride, 2.5 % DMSO90% H2O/10% D2O150 mM7.01 atm293Bruker AVANCE II 600
33D HNCO320 uM [U-13C; U-15N] NDM-1, 1280 uM morin, 0.1 mM Bis-tris, 150 mM sodium chloride, 2.5 % DMSO90% H2O/10% D2O150 mM7.01 atm293Bruker AVANCE II 600
43D HNCA320 uM [U-13C; U-15N] NDM-1, 1280 uM morin, 0.1 mM Bis-tris, 150 mM sodium chloride, 2.5 % DMSO90% H2O/10% D2O150 mM7.01 atm293Bruker AVANCE II 600
53D HNCACB320 uM [U-13C; U-15N] NDM-1, 1280 uM morin, 0.1 mM Bis-tris, 150 mM sodium chloride, 2.5 % DMSO90% H2O/10% D2O150 mM7.01 atm293Bruker AVANCE II 600
63D HN(CO)CA320 uM [U-13C; U-15N] NDM-1, 1280 uM morin, 0.1 mM Bis-tris, 150 mM sodium chloride, 2.5 % DMSO90% H2O/10% D2O150 mM7.01 atm293Bruker AVANCE II 600
73D HN(COCA)CB320 uM [U-13C; U-15N] NDM-1, 1280 uM morin, 0.1 mM Bis-tris, 150 mM sodium chloride, 2.5 % DMSO90% H2O/10% D2O150 mM7.01 atm293Bruker AVANCE II 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III800
2BrukerAVANCE II600
NMR Refinement
MethodDetailsSoftware
simulated annealingHADDOCK
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number2800
Conformers Submitted Total Number56
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpinBruker Biospin
2chemical shift assignmentCcpNmr AnalysisCCPN
3data analysisCcpNmr AnalysisCCPN
4structure calculationHADDOCKBonvin