6TO6
Solution structure of the modulator of repression (MOR) of the temperate bacteriophage TP901-1 from Lactococcus lactis
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | HCCH-TOCSY | 700 uM [U-13C; U-15N] MOR | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 950 |
2 | [1H-1H] NOESY-15N-HSQC | 700 uM [U-13C; U-15N] MOR | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 700 |
3 | aliphatic [1H-1H]-NOESY-13C-HSQC | 700 uM [U-13C; U-15N] MOR | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 700 |
4 | aromatic [1H-1H]-NOESY-13C-HSQC | 700 uM [U-13C; U-15N] MOR | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 700 |
5 | HNCO | 700 uM [U-13C; U-15N] MOR | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 600 |
6 | HN(CA)CO | 700 uM [U-13C; U-15N] MOR | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 600 |
7 | HN(CO)CACB | 700 uM [U-13C; U-15N] MOR | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 600 |
8 | HNCACB | 700 uM [U-13C; U-15N] MOR | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 600 |
9 | HSQC | 700 uM [U-13C; U-15N] MOR | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 600 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE III | 950 |
2 | Bruker | AVANCE III | 700 |
3 | Bruker | AVANCE III | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics | CNS |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | NULL EMARK: |
Conformers Calculated Total Number | 80 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | data analysis | UNIO | Herrmann, T. et al | |
5 | structure calculation | CYANA | Guntert, Mumenthaler and Wuthrich | |
6 | refinement | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
7 | chemical shift assignment | CcpNmr Analysis | CCPN |