Solution structure of the modulator of repression (MOR) of the temperate bacteriophage TP901-1 from Lactococcus lactis
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | HCCH-TOCSY | 700 uM [U-13C; U-15N] MOR | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 950 |
| 2 | [1H-1H] NOESY-15N-HSQC | 700 uM [U-13C; U-15N] MOR | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 700 |
| 3 | aliphatic [1H-1H]-NOESY-13C-HSQC | 700 uM [U-13C; U-15N] MOR | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 700 |
| 4 | aromatic [1H-1H]-NOESY-13C-HSQC | 700 uM [U-13C; U-15N] MOR | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 700 |
| 5 | HNCO | 700 uM [U-13C; U-15N] MOR | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 600 |
| 6 | HN(CA)CO | 700 uM [U-13C; U-15N] MOR | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 600 |
| 7 | HN(CO)CACB | 700 uM [U-13C; U-15N] MOR | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 600 |
| 8 | HNCACB | 700 uM [U-13C; U-15N] MOR | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 600 |
| 9 | HSQC | 700 uM [U-13C; U-15N] MOR | 90% H2O/10% D2O | 100 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 600 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE III | 950 |
| 2 | Bruker | AVANCE III | 700 |
| 3 | Bruker | AVANCE III | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| torsion angle dynamics | CNS | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | NULL EMARK: |
| Conformers Calculated Total Number | 80 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | data analysis | UNIO | Herrmann, T. et al | |
| 5 | structure calculation | CYANA | Guntert, Mumenthaler and Wuthrich | |
| 6 | refinement | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
| 7 | chemical shift assignment | CcpNmr Analysis | CCPN | |














