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Refined solution NMR structure of hVDAC-1 in detergent micelles
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D 1H-15N NOESY 0.6 mM [ U -99%- 2 H, 13 C, 15 N; 99%- 1 H delta -IL; 99%- 1 H gamma -V] hVDAC-1, 3 % [U-99% 2H] LDAO 95% H2O/5% D2O 225 mM 6.5 1 atm 303.15 Bruker AVANCE 900 2 3D 1H-13C NOESY 0.6 mM [ U -99%- 2 H, 15 N; 99%- 1 H delta , 13 C delta -IL; 99%- 1 H gamma , 13 C gamma -V] hVDAC-1, 3 % [U-99% 2H] LDAO 95% H2O/5% D2O 225 mM 6.5 1 atm 303.15 Bruker AVANCE 900 3 4D NUS-MDD-1H-13C-13C 0.6 mM [ U -99%- 2 H, 13 C, 15 N; 99%- 1 H delta -IL; 99%- 1 H gamma -V] hVDAC-1, 3 % [U-99% 2H] LDAO 95% H2O/5% D2O 225 mM 6.5 1 atm 303.15 Bruker AVANCE 900 4 4D NUS-MDD-1H-15N-13C 0.6 mM [ U -99%- 2 H, 15 N; 99%- 1 H delta , 13 C delta -IL; 99%- 1 H gamma , 13 C gamma -V] hVDAC-1, 3 % [U-99% 2H] LDAO 95% H2O/5% D2O 225 mM 6.5 1 atm 303.15 Bruker AVANCE 900 5 3D HNCO 0.6 mM U-99%-2H,13C,15N hVDAC-1, 3 % no LDAO 95% H2O/5% D2O 225 mM 6.5 1 atm 303.15 Bruker AVANCE 900 6 3D HNCA 0.6 mM U-99%-2H,13C,15N hVDAC-1, 3 % no LDAO 95% H2O/5% D2O 225 mM 6.5 1 atm 303.15 Bruker AVANCE 900 7 3D HNCACB 0.6 mM U-99%-2H,13C,15N hVDAC-1, 3 % no LDAO 95% H2O/5% D2O 225 mM 6.5 1 atm 303.15 Bruker AVANCE 900 8 3D HN(CO)CA 0.6 mM U-99%-2H,13C,15N hVDAC-1, 3 % no LDAO 95% H2O/5% D2O 225 mM 6.5 1 atm 303.15 Bruker AVANCE 900
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 900
NMR Refinement Method Details Software torsion angle dynamics CYANA
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 1000 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CYANA Guntert, Mumenthaler and Wuthrich 2 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 3 chemical shift assignment CARA Keller and Wuthrich 4 peak picking XEASY Bartels et al.