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A9 peptide derived from Herceptin fab binding region
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H NOESY 1 mM 1H A9 90% H2O/10% D2O 1 mM 6.8 1 atm 298 Varian INOVA 600 2 2D 1H-1H TOCSY 1 mM 1H A9 90% H2O/10% D2O 1 mM 6.8 1 atm 298 Varian INOVA 600 3 2D 1H-1H COSY 1 mM 1H A9 90% H2O/10% D2O 1 mM 6.8 1 atm 298 Varian INOVA 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600
NMR Refinement Method Details Software simulated annealing CYANA
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 20 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 collection VNMR Varian 3 chemical shift assignment CARA Keller and Wuthrich 2 structure calculation CYANA Guntert, Mumenthaler and Wuthrich